KEGG   Sinorhizobium alkalisoli: EKH55_3503
Entry
EKH55_3503        CDS       T06241                                 
Name
(GenBank) Ribonuclease D related protein
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
eak  Sinorhizobium alkalisoli
Brite
KEGG Orthology (KO) [BR:eak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:eak03016]
    EKH55_3503
Enzymes [BR:eak01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     EKH55_3503
Transfer RNA biogenesis [BR:eak03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    EKH55_3503
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: QFI68377
UniProt: A0A1E3V9B7
Position
1:3588947..3589573
AA seq 208 aa
MANTIRFHEGDISATDAARYTGAIAIDTETLGLVPRRDRLCVVQLSPGDGSADVIRIAAG
QRQAPNLVAMLADPARQKIFHFGRFDIAVLFHTFGVTAAPVFCTKIASRLTRTYTDRHGL
KDNLKELLDVDISKQQQSSDWAADILSPAQLEYAASDVLHLHALRDRLTERLLRDGRIEH
AEACFAFLPTRAKLDLLGWEETDIFAHS
NT seq 627 nt   +upstreamnt  +downstreamnt
atggcaaatacaataaggttccacgaaggcgatatttccgcgacggacgccgcgcgctat
acgggtgcgatcgccatcgacacggaaacgctgggccttgtcccccgccgcgaccgcctt
tgcgtcgtgcagctctccccgggcgacggcagcgccgacgtgatccgcatcgccgccggc
cagaggcaagcgccgaatctcgtagcgatgctcgccgatcccgcccgccagaagatcttc
catttcggccgcttcgatatcgcagtgctgttccacaccttcggcgtcacggcggcgccc
gtcttctgcacgaagatcgcctcgcgtctcacccgcacctatacggaccggcacgggctc
aaggacaatctcaaggaactgctcgacgtcgacatttccaagcagcagcaatcgtccgac
tgggccgccgatatcctctcgccggcgcagctcgaatatgcggcttccgacgtgctccat
ctgcatgccttgcgcgacaggctgaccgaacgcctcctgcgcgacggccgcatcgagcat
gccgaagcctgcttcgccttcctgccgacacgggccaagctggacctgctcggctgggaa
gagaccgatattttcgcccacagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system