KEGG   Escherichia albertii: EAKF1_ch0145
Entry
EAKF1_ch0145      CDS       T03986                                 
Name
(GenBank) RNase II stability modulator
  KO
K14051  c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
Organism
eal  Escherichia albertii
Pathway
eal02024  Quorum sensing
eal02026  Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:eal00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EAKF1_ch0145
   02026 Biofilm formation - Escherichia coli
    EAKF1_ch0145
Enzymes [BR:eal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.52  cyclic-guanylate-specific phosphodiesterase
     EAKF1_ch0145
SSDB
Motif
Pfam: EAL GGDEF PAS_9 PAS GGDEF_2 PAS_4 PAS_10
Other DBs
NCBI-ProteinID: AHE58067
Position
156765..158723
AA seq 652 aa
MYNFLGSHNPYWRLSENSDVLRFSCNEATEPERTLLLSAEQAARIREMTVITSGLMMNLV
VEESDLSVHLVGRKINRREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS
RGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMNRREAAISRRNNSGFFRSGNAYEVERWV
QTRKGQRLFLFRNKFVHSGSGKNEIYLICSGTDITEERRAQERLRILANTDSITGLPNRN
AMQELIDNAIKQADGNKVGVVYLDLDNFKKVNDAYGHVFGDQLLREVSLAILSCLEQDQV
LARPGGDEFLILAPNTSQSALEAMASRILTRLRQPFSIGLIEVYTGCSVGISLSPQHGMD
SAAIIRHADTAMYTAKEGGRGQFCVFSPEMNQRVFEYLWLDTNLRKALENNQLVIHYQPK
ITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK
GINLRVAVNISARQLADQTIFTDLKQVLQELKFEYCPIDVELTESCLIENDELALSVIQQ
FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQIFVRDIHKQPVSQSLVRAIVAVAQA
LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA
NT seq 1959 nt   +upstreamnt  +downstreamnt
ttgtacaactttctcggatcgcacaacccatactggcgtttgtcggaaaatagtgatgtt
ttacgtttctcctgtaacgaagcaacggaaccagagcgaactctgctgttatctgcggaa
caggctgcacgtatcagggaaatgacggtcatcacgtctggtttgatgatgaacttagtc
gtcgaggagagcgacctctctgttcatctggtaggccgtaagatcaataggcgtgaatgg
gccgggaatgcgtctgcatggcatgacacacctgcggtagcccgcgatttatcgcacgga
ctatcctttgctgaacaagtggtttctgaagcgcattctgcaattgtgattctggacagc
cggggaaatatccaacgttttaatcggttatgcgaagaatataccggactaaaagagcac
gatgtcattggacaaagcgtgtttaaattgtttatgaatcgccgcgaggctgctatctca
cggcgtaacaacagtggttttttccgtagcggcaacgcttatgaagtggaacgctgggta
cagacgcgtaaaggccagcgattgtttctgttccgcaacaaattcgtacatagcggtagc
ggtaaaaatgaaatctatttgatctgctccggcaccgatatcaccgaagagcgtcgtgcc
caggaacgactgcgaattctggctaacaccgatagcatcaccggattgccgaatcgtaac
gcaatgcaggagttgatcgataacgccattaagcaggcggacggcaacaaagttggtgtg
gtttatcttgatttagacaattttaaaaaggtgaatgatgcctacggacacgtgtttggc
gatcagttattacgcgaggtttcactagctattttaagctgccttgagcaggatcaggta
ctggcacgcccaggcggcgatgaatttctgatactcgcgccaaacacctcgcaaagcgcg
ttagaagcgatggcgtcgcgcattttaacccgtcttcgccagcccttcagtattggttta
attgaagtctatactggctgttcagtcggcatttcactttctccgcaacatggtatggat
agtgcagccattattcgccatgccgatacggcaatgtacacggcgaaggaaggtggccgt
gggcagttttgcgttttttctccagaaatgaatcaacgagtatttgaatatctctggctg
gataccaacctgcgtaaagctctggaaaacaatcagttagtcattcactatcaacccaaa
atcacctggcgcggtgaagtacgaagtctggaagcattggtgcgctggcaatcgcccgaa
cgtggattgattccaccgctggactttatttcctacgccgaagagtccgggctaattgtc
cctttaggccgctgggttattcttgatgtcgtacgccaggtggcgaagtggcgggataaa
ggcatcaacctgcgagtagcggtgaacatctctgcgcggcaacttgccgatcaaaccatt
ttcaccgaccttaaacaggtccttcaggaacttaaatttgaatactgccctattgatgtc
gagctaaccgaaagttgtctgattgaaaatgatgaactggcgctgtccgttattcagcaa
tttagccagttaggggcgcaagtacatctggatgatttcggcaccggctactcttcgctt
tctcaactggcgcgcttccctatcgacgccataaaactcgatcagatttttgtccgtgat
attcacaaacagccggtttcgcaatcgctggtacgtgcgatcgttgccgtagcccaggcg
ctgaatcttcaggtgattgcggagggggtagaaagcgcaaaagaagacgcctttttaacc
aaaaatggcatcaatgagaggcaaggtttcttgtttgcaaaaccgatgcccgctgtcgct
tttgaacgctggtataaacgttatctgaaacgtgcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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