KEGG   Klebsiella aerogenes EA1509E: CCG30655
Entry
CCG30655          CDS       T02447                                 
Name
(GenBank) Ribonuclease E (EC 3.1.26.12)
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
ear  Klebsiella aerogenes EA1509E
Pathway
ear03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ear00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CCG30655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ear03019]
    CCG30655
   03009 Ribosome biogenesis [BR:ear03009]
    CCG30655
Enzymes [BR:ear01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     CCG30655
Messenger RNA biogenesis [BR:ear03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CCG30655
Ribosome biogenesis [BR:ear03009]
 Prokaryotic type
  rRNA processing factors
   CCG30655
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio PNPase_C S1
Other DBs
NCBI-ProteinID: CCG30655
Position
1904943..1908155
AA seq 1070 aa
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLQLPDGMGLIVRTAGVGKSAEAL
QWDLSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA
RQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE
NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS
LSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIETRQSDIRVIIVPNDEMQ
TPHYSVLRVRKGEETSTLSYLLPKLHEEEMAMPSDEEPAERKRREEPALAAFVMPDAPPA
PVQEETAAAPTAAKAAAAPAAKVATPAQPGLLSRFFGALKNIFSGAEEAKPAEVKAEQKT
EEKPERQQERRKPRSNNRRDRNDRRDNRDNRDNRDNRDNRGENTEGREPRESREENRRNR
RDKQSQNAELRESRQNAGDESDKGKSRDEQQQPRRERNRRRNDDKRQAQQEAKTQTREEP
VVQQETEQEERVQSMPRRKPRQLAQKVRFESAETEQVVEAVAEQQAESTTPRTELAKVDL
PAVVETAAEQDENGDARESNGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLAIAC
ASPELASGKAWIRYPIARAHDQQQEELPVQETANVEPIITPVVAETIAPVVVAETVAAET
VVPAVASEPTVVEAPVVEETAVVEETAIVAESVAPQAEVSEPAEPVVEETETAPAPATEE
TVTAQPTIAEEETAVVEETTVASVEEAAPVVEPTPVISTAPVVKAQPATTATRHATAPMT
RAPAPEYVPEAPRQSDWVRPPFAFEGKGSAGGHSATHQATAEATRPQPVE
NT seq 3213 nt   +upstreamnt  +downstreamnt
atgaaaagaatgttaatcaacgcaactcagcaggaagagttgcgcgtcgctcttgttgat
gggcagcgcctgtacgacctggatatcgaaagccccgggcacgagcagaaaaaagcgaac
atctacaaaggcaaaatcactcgtattgaacctagccttgaagccgcgtttgtcgattac
ggcgctgagcgtcatggtttcctccccctcaaagaaattgcccgcgaatacttcccagcc
aattacagcgctcatggccgccctaacattaaggacgttctgcgcgaaggtcaggaagtc
attgttcagattgataaagaagagcgcggtaataaaggcgccgcgctgaccacctttatc
agcctggcaggcagctacctggtactgatgccgaacaaccctcgcgccggcggcatttcg
cgccgtatcgaaggtgacgatcgtaccgagctgaaagaagcgctggcgagccttcagctg
ccggacggcatgggtcttatcgtgcgtaccgcgggcgttggcaaatccgctgaagcgctg
cagtgggatctgagcttccgcctgaagcactgggaagcgattcagaaagccgctgagagc
cgccctgctccgttcctgatccaccaggaaagtaacgttatcgtgcgtgccttccgcgac
tatctgcgccaggacatcggcgaaatcctaatcgataatccgaaagtgcttgagctggcg
cgccagcatatcgccgccctcggtcgtccggatttcagcagcaaaatcaaactgtacacc
ggtgaaattccgctgttcagccactaccaaattgaatcccagattgaatccgcgttccag
cgtgaagtgcgtctgccgtccggtggttctatcgttatcgatagcaccgaagcgctgacc
gctatcgacatcaactccgctcgcgcgacccgcggcggcgatatcgaagaaacggcgttc
aacactaacctcgaggcggctgacgaaatcgcacgccagttgcgtctgcgcgaccttggc
ggcctgatcgttatcgacttcatcgatatgaccccggtccgccaccagcgtgcggttgaa
aaccgcctgcgtgaagccgtccgccaggaccgcgcgcgtatccagatcagccatatctcg
cgcttcggcctactggagatgtcccgccagcgtctgagcccgtcgctgggcgaatccagc
caccacgtgtgcccacgctgtagcggcaccggtaccgtgcgtgacaacgaatcgctgtcg
ctctctatcctgcgcctgattgaagaagaagcgctgaaagagaacaccaaagaagtccac
gcgatcgttccggtacctatcgcttcttacctgcttaacgaaaaacgtgccgcagtcagc
gcgattgaaacccgccagagcgacattcgcgtcatcatcgtccctaacgatgagatgcaa
accccgcactactccgtactgcgcgtgcgtaaaggcgaagaaacctccacgctgagctat
ttgctgccgaaactgcacgaagaagagatggcgatgccgtctgacgaagaaccggctgaa
cgcaaacgccgcgaagagccagcgctggctgctttcgtgatgccggatgcgccgcctgcg
ccggtacaggaagaaaccgcagccgcgccgaccgcagcgaaagccgccgctgctccggca
gcgaaggtagcaacgcctgcccagcctggtctgctgtcccgcttcttcggcgcgttgaaa
aacatcttctccggcgcagaagaagctaaaccggctgaagtcaaagccgagcaaaaaact
gaagagaaacctgagcgtcagcaagagcgccgtaaaccgcgttctaataatcgccgcgac
cgtaacgaccgtcgtgataaccgcgataatcgtgacaaccgtgataatcgtgataatcgc
ggagaaaacacagaaggtcgcgaacctcgtgaatcacgcgaggagaaccgccgtaatcgt
cgtgacaaacaatcacagaacgctgaactgcgcgaatctcgccaaaacgcgggcgatgag
tctgataaaggcaaatcacgcgatgagcaacagcaaccgcgccgtgaacgcaaccgccgt
cgtaatgatgacaagcgtcaggcacagcaggaagcgaaaactcagacccgcgaagaaccg
gtagtacagcaggaaaccgagcaggaagagcgcgttcagagcatgccgcgtcgtaagccg
cgtcagctggcgcagaaagtccgctttgaatccgcagaaaccgagcaggttgtcgaagcc
gttgctgagcagcaggcggaatccactacgccgcgtacggaactggcaaaagtcgatctg
ccggccgtcgttgaaactgccgctgagcaggatgaaaacggcgacgctcgtgaatctaac
ggtatgccgcgtcgctctcgtcgttctccgcgccacctgcgcgtaagcggccaacgtcgc
cgtcgttaccgcgatgagcgttatccgacccagtcgccgatgccgctggccatcgcctgc
gcgtcgcctgagctggcgtcaggtaaagcgtggatccgctatccaattgcccgtgcgcat
gatcagcagcaggaagagttaccggtacaggaaaccgccaacgttgagcctatcattacg
ccagtcgtcgcggagactatcgctccggttgtcgttgcggaaaccgtcgcagctgaaact
gtcgtaccggcagtggccagcgaaccgaccgtagttgaagctccggtcgtcgaagaaacg
gcggtggttgaagagaccgcaattgttgcggaaagcgttgcgccgcaggcagaagtcagt
gagccagcagagccggtagtcgaagaaactgagaccgcacctgctccagctactgaagaa
accgtcactgcgcagccaacgattgccgaagaagaaaccgctgttgtcgaagaaacgacc
gttgcctccgttgaagaagccgcgccggttgttgaaccgacgccggtcatcagcaccgcg
ccagtggtgaaagcgcaaccggcgaccaccgctactcgccatgcgaccgcgccgatgacc
cgcgcaccggctccggaatacgtgccggaagcgccgcgccaaagcgattgggttcgtcct
ccgtttgcctttgagggtaaagggtctgcaggcggccatagcgccactcatcaagccacg
gcggaagctacccgtccgcagcctgtagagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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