KEGG   Erwinia amylovora ATCC 49946: EAM_2679
Entry
EAM_2679          CDS       T01199                                 
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma subunit RpoS (sigma-38)
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
eay  Erwinia amylovora ATCC 49946
Brite
KEGG Orthology (KO) [BR:eay00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eay03021]
    EAM_2679 (rpoS)
Transcription machinery [BR:eay03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EAM_2679 (rpoS)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: CBJ47353
Position
complement(2918080..2919072)
AA seq 330 aa
MSQNTLKVNELNEDAEFDENGAEVFDEKALVGNEPGDNELAEEDLLSQGATQRVLDATQL
YLGEIGYSPLLTAEEEVFFARRALRGDVPSRRRMIESNLRLVVKIARRYSNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEKLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQGQGLSIEALFRE
NT seq 993 nt   +upstreamnt  +downstreamnt
atgagccagaatacgctgaaagttaacgagttaaatgaagacgcggaattcgacgaaaac
ggagcagaggtttttgatgagaaggctcttgtcggaaatgaacctggtgataacgagtta
gctgaagaagatttgttatctcagggtgcaacacagcgcgtgctggatgcaacccagctc
tacttgggagagattggttactctccactgctcacggctgaggaagaagtcttttttgcc
cgtcgtgcactccgtggtgatgtgccttcacgtcgtcggatgatcgaaagtaacttacgc
ctggtggtcaagattgcccgacgttacagcaatcgcggtctggctctgctggacctgatt
gaagaaggtaaccttggactgatccgtgcggtagagaaatttgatccggaaagagggttc
cgtttttctacttacgccacctggtggatccgtcagacgattgaacgggcaatcatgaat
caaacccgtaccattcgtctgccgatccacattgtgaaagaactgaatgtttatctgcgc
accgcgcgagaactctcacataagctcgatcatgagccaagtgcggaagagattgcggaa
aagttagataagcctgttgatgacgtgagccggatgctgcgcctcaacgaacgcattacc
tcagttgatacgccactgggcggggattctgaaaaagcgttgctggatattctggccgat
gaaaaagacaacggcccggaagataccacccaagacgatgatatgaaacaaagcatcgtt
aagtggctgtttgaactcaacgccaagcagcgtgaagtactggctcgccgttttggcctg
ttaggctatgaagcggccacgctggaagatgtaggccgtgaaattggtttgacccgtgag
cgtgttcgtcagattcaggttgaaggactgcgtcgtctgcgtgaaatactgcaggggcag
ggattgagtattgaagcactcttccgtgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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