KEGG   Enterobacteriaceae bacterium ENNIH2: C2U52_06765
Entry
C2U52_06765       CDS       T05417                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
ebc  Enterobacteriaceae bacterium ENNIH2
Pathway
ebc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ebc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    C2U52_06765 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ebc03021]
    C2U52_06765 (rpoB)
   03400 DNA repair and recombination proteins [BR:ebc03400]
    C2U52_06765 (rpoB)
Enzymes [BR:ebc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     C2U52_06765 (rpoB)
Transcription machinery [BR:ebc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     C2U52_06765 (rpoB)
DNA repair and recombination proteins [BR:ebc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      C2U52_06765 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2
Other DBs
NCBI-ProteinID: AUV06009
Position
complement(992287..996315)
AA seq 1342 aa
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIA
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALDYTTEQILDLFFEKVVFEIRDNKLQME
LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDEIQHIEVPVEYIAGKVASKD
YVDESTGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKEDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGMVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIYAVLVSGGIEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQKAYDLGADVRQKVDLNTFSDEEVLRLAENLKKGMPIATPVFDGAKEAEIKELLQ
LGDLPTSGQITLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq 4029 nt   +upstreamnt  +downstreamnt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggacattccatatctcctttctatccagcttgactcgttccagaagtttatcgag
caagatcctgaagggcagtacggcctggaagcggctttccgctccgtgttcccaattgcc
agctatagcggcaattctgaactgcagtacgtcagctaccgtcttggcgaacctgtattt
gacgttaaagaatgtcaaattcgtggcgtaacctattccgcaccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgttaaagacattaaagaacaa
gaagtgtacatgggcgaaattccgctcatgaccgacaacggtacttttgtcatcaacggt
actgagcgcgttatcgtttctcagttgcaccgtagtcctggcgttttcttcgacagcgac
aaaggcaaaacccactcttctggtaaggtgctttataacgcgcgcatcatcccttaccgt
ggttcctggctggacttcgagttcgatccgaaagacaacctgtttgttcgtattgaccgt
cgtcgtaaattgcctgcgaccattattctgcgcgcactggattacaccactgagcagatt
cttgatctgttctttgaaaaagttgtcttcgaaattcgcgacaacaagctgcagatggaa
ctggtgccggaacgcctgcgtggcgagactgcatctttcgacatcgaagctaacggtaaa
gtctatgtagaaaaaggccgccgcattactgcgcgccatattcgtcagctggaaaaagac
gagattcagcacatcgaagtaccggttgagtacatcgctggtaaagtcgcgtccaaagat
tacgtggatgagtctaccggtgagctgatctgcccggcgaacatggagttgagcctggat
ctgctggctaaactgagccagtctggtcacaagcgtatcgaaacgctgttcaccaacgat
ctggaccacggtccgtacatctctgagactgtacgcgtcgacccaaccaacgatcgtctg
agcgcgctggtagaaatctatcgcatgatgcgtcctggtgagccgccgactcgtgaagct
gctgaaagcctgttcgagaacctgttcttctccgaagaccgctacgatctgtccgcggtt
ggtcgtatgaagttcaaccgttctctgctgcgcgacgagatcgaaggttccggtatcctg
agcaaagaagacatcatcgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtcgatgatatcgaccacctcggcaaccgtcgtatccgttccgttggcgaaatggcg
gaaaaccagttccgcgttggcctggtccgcgttgagcgtgcggtgaaagagcgtctgtct
ctgggcgatctggataccctgatgcctcaggacatgatcaacgccaagccgatttctgcg
gcagtgaaagagttcttcggttccagtcagctgtctcagtttatggaccagaacaacccg
ctgtcagagatcacgcacaaacgtcgtatctccgcactcggcccaggcggtctgacccgt
gaacgtgcaggctttgaagttcgagacgtacacccgactcactacggtcgcgtatgtcct
atcgaaacgcctgaaggtccaaacatcggtctgatcaactccctgtccgtgtacgcacag
acaaacgaatacggtttcctcgagaccccgtatcgtaaagtgactgacggtgttgtaacc
gacgaaattcactacctgtctgctatcgaagaaggcaattacgttatcgctcaggcgaac
tccaacctggatgacgaaggccactttgtagaagatctggttacctgccgtagcaaaggc
gaatcaagcttgttcagccgcgatcaggttgactacatggacgtatccacccagcaggtg
gtttccgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggcggttccgactctgcgcgctgataagccgctggtt
ggtaccggtatggaacgtgctgttgccgttgactccggtgttactgcggttgctaaacgt
ggtggtatggttcagtacgttgatgcgtcccgtatcgttatcaaagttaacgaagacgag
atgtacccaggcgaagccggtatcgacatctacaacctgaccaagtacacccgttctaac
cagaacacctgtatcaaccagatgccgtgtgtctctctgggtgagccaatcgagcgcggc
gacgtgctggcagatggcccgtccactgaccttggtgaactggcgctcggtcagaacatg
cgcgtagcgttcatgccgtggaacggttacaacttcgaagactccatcctcgtatctgag
cgtgttgtccaggaagaccgtttcaccaccatccacattcaggaactggcgtgtgtgtcc
cgtgacaccaagctggggccggaagagatcaccgctgacatcccgaacgtgggtgaagct
gcgctctccaaactggatgaatccggtatcgtttacatcggtgcggaagtgaccggcggt
gacattctggttggtaaggtaacgccgaaaggtgaaacccaactgaccccagaagaaaaa
ctgctgcgtgcgatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgtg
ccaaacggtgtctctggtaccgttatcgacgttcaggtctttacccgcgatggcgtagaa
aaagacaaacgtgcactggaaatcgaagagatgcagctcaaacaggccaagaaagacctg
tctgaagaactgcagatcctcgaagccggtctgttcagtcgtatctacgcggtgctggtt
tccggtggcatcgaagctgagaagctcgacaaactgccacgtgaccgctggctggaactc
ggtctgaccgacgaagagaaacaaaatcagctggaacaactggctgagcagtatgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgcaaaatcacccagggcgat
gatctggcaccaggcgtgctgaaaatcgttaaggtttatctggccgttaaacgtcagatc
caaccgggtgacaaaatggcaggtcgtcacggtaacaagggtgttatctcgaagatcaac
ccgatcgaagatatgccgcacgatgctaacggtacgccggtagatatcgtactgaacccg
ctgggcgtaccgtctcgtatgaacatcggtcagattctggaaacccacctgggtatggct
gcgaaaggtatcggcgataagatcaatgccatgctgaaacagcagcaagaagtcgcgaaa
ctgcgcgaattcatccagaaagcgtatgacctcggtgccgatgttcgtcagaaagttgac
ctgaacaccttcagcgatgaagaagtactgcgtctggctgagaacctcaaaaaaggtatg
ccaatcgcaacgccggtattcgacggtgcgaaagaagctgagattaaagagctgctgcaa
ctgggtgacctgccgacttccggtcagatcacactgtatgacggccgcaccggtgaacag
ttcgagcgtccggtaaccgtaggttacatgtacatgctgaaactgaaccacctggtcgac
gacaaaatgcacgctcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggcgcagttcggtggtcagcgcttcggggagatggaagtgtgggcgctggaagct
tacggcgccgcctacaccctgcaggaaatgctcaccgttaagtctgatgacgtgaacggt
cgtaccaagatgtataaaaacatcgtggacggcaaccatcagatggaaccgggcatgccg
gaatccttcaacgtactgttgaaagagattcgttcgctgggtatcaacatcgaactggaa
gacgagtaa

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