KEGG   Endosymbiont of Bathymodiolus septemdierum: BSEPE_0384
Entry
BSEPE_0384        CDS       T04606                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
ebh  Endosymbiont of Bathymodiolus septemdierum
Pathway
ebh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ebh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BSEPE_0384 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ebh03400]
    BSEPE_0384 (uvrA)
DNA repair and recombination proteins [BR:ebh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BSEPE_0384 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BSEPE_0384 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 BCA_ABC_TP_C AAA_23 RsgA_GTPase AAA_21 nSTAND1 nSTAND3 AAA_22 AAA_33 NACHT MeaB DnaJ_CXXCXGXG Viral_helicase1 cobW MobB NTPase_1
Other DBs
NCBI-ProteinID: BAS67397
UniProt: A0A0P0UQE3
Position
365563..368379
AA seq 938 aa
MDQISIRGARVHNLKNIDIDIPRNKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKATSHNPRSTVGTITEIYDYLRLLFARVGLPKC
PKHGIDLVSQTISQMVDSIMALSEGEKIMILAPVVQNRKGSHVKMLEELSHQGFLRARVD
GEIVYLDDMQELEGKTHHTIEIVIDRLKIRKDIASRLSESLETALNLSAGLVRIAAIELD
SRQEELVFSAKFSCTECGYSLTELEPRLFSFNNPVGACQSCDGLGIKEIFDDHKVVSNPT
ASLAEGAIYGWGRSNAYFYQILFLVGQHYGFSVDTPYEELSEKHQKIILHGSGNDEIDFS
KIKGRKGWSNKAKPFEGVIPRMMRRYEESEIRSVREELSRYVVSKNCGSCNGSRLNESAR
NVFIGEYNLSDISKLSIANSHDFFKHLKLDGVRGEIAEKILKEIIQRLEFLLNVGLEYLS
LERRSGTLSGGEAQRIRLASQIGAGLMGVLYVLDEPSIGLHQRDNQKLLNTLIYLRDIGN
TVIVVEHDEDAIKQADFVIDIGPGAGIHGGEIIATGTPQEISENPKSITGDYISGRQSIA
VPKQRKTATDWLHIKGATGNNLNKVDLAIPIGVLTCVTGVSGSGKSTLINDTLYSLAARG
LNRSQIVPAPHESIEGLEYCDKVVNIDQSPIGRTPRSNPATYTSVFTLIRDLFSQTLEAR
SRGYKAGRFSFNVKGGRCEACKGDGLIKVEMHFLADIYVPCDVCSGDRYNRETLEITYKG
KTIAEILNMTVEIAVKFFDPIPKIKQKLQTLMDVGLSYITLGQNATTLSGGEAQRIKLAK
ELSKPDTGQTLYILDEPTTGLHFHDIKQLLSVIMRLRERENTIVIIEHNLDVIKTADWVV
DLGPEGGDKGGNIIATGTPEEVAEVKGSYTGQYLKEMI
NT seq 2817 nt   +upstreamnt  +downstreamnt
atggatcaaattagcatacgcggcgcacgcgttcataatctaaaaaatatcgatattgat
attcctagaaataaactggttgttattacaggtttgtccggatcaggcaagtcctcactt
gcatttgataccatttatgccgaaggacagcgtcgttatgtagaatcattatctgcctat
gccagacagtttttatcgttaatggaaaaaccagatgttgatcatattgaaggtttatcc
cctgccatttccatagagcaaaaagccacttctcacaatccgcgctcaaccgtaggtacc
atcacagaaatctacgattatttgcgactgctcttcgctcgcgttggtttgccaaagtgt
ccaaagcatggcattgatttagtctcacaaactatttcgcaaatggtggacagtattatg
gcattgtcagaaggtgaaaaaattatgatattagcccctgtggtgcaaaaccgcaagggc
agtcatgtcaaaatgttagaagaactttctcaccagggttttttgcgtgccagagtcgat
ggtgagattgtctatttagatgatatgcaagaattagaaggtaaaactcatcatactatt
gagattgtgattgaccgtttaaaaatccgtaaagacattgcttctcgcctatctgaatcc
ctagagaccgctttaaatttgagtgcaggattggttagaattgcagccatagaattggat
tcaaggcaagaagaattggtattttctgctaaattttcgtgcactgaatgtggctactct
ttaactgaattagagccaagattattttcgtttaacaatccagttggcgcttgtcaaagt
tgcgatggtttgggtattaaagagatttttgatgaccacaaagtcgttagcaatccaact
gccagtcttgccgaaggtgcaatttacggttggggtcgctcaaatgcttatttctaccaa
atcttatttctagtcgggcaacattacggttttagcgttgataccccttacgaagaactt
agtgagaaacatcaaaaaatcatcctccacggtagtggtaacgacgaaattgacttttca
aaaatcaaaggacgcaaaggctggtcaaacaaagccaaaccctttgaaggtgtgattcca
agaatgatgcgtcgctacgaagaaagtgaaatccgttccgtgcgtgaagaattatctcgt
tatgtggttagtaaaaattgtggcagttgtaacggtagtcgtttaaatgaatctgccaga
aatgtttttatcggcgaatataatttatccgatatcagtaaactctctattgctaatagc
catgattttttcaaacatttaaaactagatggtgtacgaggtgagattgccgaaaaaatc
ctaaaagaaatcattcaacgcttagaatttttacttaatgttggtttagaatatctcagt
ttagagcgccgttcaggtactttgtcaggtggagaagcacaacgcattcgtcttgccagt
cagattggtgcaggactgatgggtgtgctatatgtgttagatgagccctcaatcggcttg
caccaacgcgacaatcaaaaactcttaaacactttgatttatctccgtgatataggcaat
actgtgattgtcgttgagcacgatgaagatgctattaaacaagccgattttgttatcgac
attggaccaggcgcaggcattcatgggggtgaaattattgccactggcaccccgcaagag
atcagtgaaaatccaaaatctatcactggtgactacattagcggtcgtcaaagcattgcc
gtgccaaaacaacgcaaaactgcaaccgattggctacacatcaaaggtgcaacgggtaac
aaccttaataaagtagacttagctatccccatcggtgtcctgacttgcgttacaggtgtt
tcgggctcgggaaaatccactctgattaacgacaccctgtattcgctcgctgctagaggt
ttaaatcgttcgcaaatcgttcccgcgccacatgaatccattgagggtttagaatattgc
gacaaagttgtcaacattgaccaaagccctattggtcgcacccctcgttcaaacccagcc
acttatacgagcgtgtttactcttattcgtgatttattttcacaaactttagaagcccgt
tctcgtggctataaagcagggcgtttcagttttaatgttaaaggtggccgctgcgaggcg
tgtaaaggcgatggcttgattaaagttgaaatgcatttcttagctgatatctatgtccct
tgtgatgtttgcagcggcgaccgctataatcgtgaaactttggaaatcacctataaagga
aaaacgattgctgaaatattaaatatgactgttgaaatcgccgtcaaatttttcgatccc
attccaaaaattaaacagaaactgcaaaccctaatggatgtcggtttatcctacattacc
ctcggacaaaatgctacaacgctttcaggcggtgaagcacaacgcattaaactcgccaaa
gaactgtcaaagcctgacactggacaaacactctatattcttgatgagccaaccactggc
ctacattttcacgacatcaaacaattgttatctgtgattatgcgtttgcgagaacgagaa
aacacgattgttattattgagcataatcttgatgttattaaaactgccgattgggttgta
gatttaggccctgaaggtggcgataaaggcggcaatatcattgccactggtacgccagaa
gaagttgcagaggttaaaggttcttacacagggcaatatttgaaagaaatgatttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (57)   

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