KEGG   Endosymbiont of Bathymodiolus septemdierum: BSEPE_0675
Entry
BSEPE_0675        CDS       T04606                                 
Symbol
rpsA
Name
(GenBank) small subunit ribosomal protein S1
  KO
K02945  small subunit ribosomal protein S1
Organism
ebh  Endosymbiont of Bathymodiolus septemdierum
Pathway
ebh03010  Ribosome
Brite
KEGG Orthology (KO) [BR:ebh00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    BSEPE_0675 (rpsA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:ebh03011]
    BSEPE_0675 (rpsA)
Ribosome [BR:ebh03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    BSEPE_0675 (rpsA)
  Bacteria
    BSEPE_0675 (rpsA)
SSDB
Motif
Pfam: S1 Spt6_S1 CsrA
Other DBs
NCBI-ProteinID: BAS67672
UniProt: A0A0P0UR24
Position
641069..642742
AA seq 557 aa
MSESFAELFENSVEQQNTKIGALLMGTVVDINREKAIINVGLKSEGFVSLDQFKDAKGEL
EIAEGDIVEVALESIDDGLGHTLLSREKAKRIKLWQTLEIAMNQKEVVTGIVTGAVKGGL
TVDIGVVKAFLPGSLVDTHPVKDFSYLTGQEIEAIVIKMDEVRNNIVISRKAVMQEANSA
DREALLEGLEQGQEIEGIVKNLADYGAFVDLGGVDGLLHITDISWQRVNHPSEKLTIGDK
IIVKILNYDKEKMRVSLGLKQLTASPWDNISDRLPLGKKVLGTVSNLTDYGAFVRIEEGV
EGLVHVSEMDWTNANARPSKIVKLGQEVDVVVLDVQESKHRISLSMKQAQENPWEAFEAS
HNKGDKIGVTVKSITDFGLFVGLPGGIDGLIHLADLAWEKLPADELVSNYSKGQELEVVI
LNIDAEKERISLGIKQLQEDDFSSYATSNKKGSVVKVTITEVTPRGAVVALADDVTGYLK
AGEISEERVEDASTMLKVGDEIEVAIINIDRKTRNVSVSIKAKNSVEEKAAMADYNKQSS
SEIEGATLGDLLKKAKK
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgtcagaatcatttgcagaactatttgaaaatagtgtagaacaacaaaataccaaaata
ggtgccttattaatgggtacagtcgtcgatattaatcgtgaaaaagcgattattaatgtt
ggtttgaaatcagagggctttgtttctctggaccaatttaaagacgcgaagggtgaacta
gaaattgccgaaggcgatatcgtagaagttgccttggagtctattgacgacggtttgggt
catactttattatcacgcgaaaaagcgaaacgcattaagttatggcagacgcttgaaatt
gcaatgaatcaaaaagaagtggttactggtattgttaccggtgccgttaaaggcggactt
actgttgatattggtgttgttaaagcatttttaccaggttcattggtagacactcaccca
gttaaagatttttcataccttaccggtcaagaaattgaagcaattgttattaagatggac
gaagttagaaacaacatcgttatttctagaaaagcggttatgcaagaagccaattctgct
gacagagaagcgttacttgaaggtcttgaacaaggtcaagaaattgaaggtatcgttaaa
aaccttgctgactacggtgcattcgttgaccttggcggtgttgatggtttattgcatatt
actgacatctcatggcagcgcgttaaccatccgtctgagaagttgacgattggcgataaa
attatcgttaaaatccttaattacgataaagagaaaatgcgtgtttcattaggacttaag
caattgactgcaagtccttgggataacatctccgaccgtctaccgttaggtaagaaagtc
ttgggtacggtttctaatttgacagattacggagcgtttgttcgcattgaagagggtgtt
gaaggtttggtgcatgtatcagaaatggactggactaacgccaatgctcgcccttctaag
attgttaaacttggtcaagaggttgatgtggttgttttggatgttcaagaatctaagcac
cgtatttcattgtcaatgaaacaagcgcaagaaaacccttgggaagccttcgaagcgagc
cataataagggtgacaagattggtgtaactgttaaatcaatcacagacttcggtttgttc
gttggtcttccaggtggtattgatggtctaattcacttagccgatcttgcttgggaaaaa
ttaccagcagacgagttagtttctaattattctaaaggtcaagagcttgaagtggttatc
ttaaatatcgatgcagaaaaagaacgaatttcattaggtatcaagcaattacaagaggac
gatttctcatcttatgcaacctctaacaagaagggttcagtggttaaagtaacaattact
gaggttacacctcgtggtgcagttgttgccttggcagacgatgttacaggttacttgaaa
gctggtgaaatctcagaagagcgtgttgaagatgcgtcaaccatgttgaaagtgggtgat
gaaatcgaagtagcgattattaatattgacagaaagacgcgcaatgtttcagtcagtatt
aaggcgaaaaattcagtagaagaaaaagcggcaatggcagactacaataagcaatcttct
agtgaaatagaaggggcaacgctaggtgatttgttaaagaaagctaagaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system