KEGG   Erwinia billingiae: EbC_28930
Entry
EbC_28930         CDS       T01270                                 
Symbol
sbcB
Name
(GenBank) Exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
ebi  Erwinia billingiae
Pathway
ebi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ebi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    EbC_28930 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ebi03400]
    EbC_28930 (sbcB)
Enzymes [BR:ebi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     EbC_28930 (sbcB)
DNA repair and recombination proteins [BR:ebi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     EbC_28930 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     EbC_28930 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EbC_28930 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: CAX60424
UniProt: D8MUB7
Position
3218518..3219945
AA seq 475 aa
MKENKPQPTFLFHDYETFGKSPSLDRPAQFAGIRTDMDFNIIGEPEVFYCQPADDYLPQP
EAVMITGITPQLAKAKGISEAAFTKRIHALFSEPNTCIVGYNNVRFDDEVTRNLLYRNFY
DPYGWAWQHGNSRWDLLDVMRACYALRPEGIAWPENDDGLPSFRLEHLTKANGVSHENAH
DAMSDVYATIAMAKLVKEKQPRLYDFLFTHRNKNKITALIDIPQMKPLVHISGMFGAFRG
NTSWIAPLAWHPVNKNALITCDLAGDITPLLELDADTLRERLYTRREELGDNAPVPVKLM
HINKCPVVAPANTLRPEDAERLGIDRKRCLDNLAILRQHPEVREKVVALFAEAEPFAGSS
DVDAQLYDGFFSDADRNTMNIIQQTLPENLPALDLTFNDARIEKLLFRFRARNYPGTLDE
AEQTRWLQHRREALNPERVQSYVQELEMLFNQYEGDIGKEKDLKMLFQYVQNLTS
NT seq 1428 nt   +upstreamnt  +downstreamnt
gtgaaagagaacaagccccagcccaccttcctgttccatgactatgagaccttcggcaaa
agcccgtcgctggaccgccctgcgcagttcgccgggatccgaaccgacatggacttcaac
atcatcggtgagcctgaggtgttctactgtcagcctgcggatgactacctgccacagccg
gaagcggtgatgatcaccgggattacccctcagttggcgaaagctaaagggatctccgag
gctgctttcaccaaacgtattcatgcgctgttcagcgagcctaatacctgcatcgttggc
tataacaatgtgcggtttgatgatgaggtcacgcgcaacctgctttatcgcaacttttac
gatccctatggctgggcctggcagcacggtaatagccgctgggatttgctggatgtgatg
cgagcctgctacgcattgcgtcctgaagggatcgcgtggccagaaaatgatgacggtttg
ccgagtttccgtctggagcatctcactaaagccaacggcgtttcccatgagaatgcgcat
gatgcgatgtctgatgtatacgcgactatcgctatggcaaagctggtgaaagagaagcag
ccgcgcctgtatgacttcctgttcacccatcgcaataagaacaagatcactgcgttgatt
gatattccgcagatgaagccgctggtgcatatctccggaatgtttggcgcgtttcgtggc
aacaccagctggattgccccgctggcgtggcacccggtcaataaaaatgcgttgattacc
tgtgatttggccggggatatcactcccctgctggagttggatgcggataccctgcgtgag
cgtttgtatacccgccgtgaggaactgggtgataacgcgccggtgccggtcaagctaatg
catatcaacaaatgcccggtggtggcgccggccaatacgctgcgtcctgaagatgctgaa
cgtttggggatcgatcgcaagcgttgcctggataacctcgcgatactgcgtcagcatccg
gaagtgcgggaaaaagtggtggcgttattcgctgaagccgagcctttcgccggctccagc
gacgtagatgcccagctgtatgacggcttcttcagcgatgccgaccgcaataccatgaac
attattcagcagacactgccggagaatttaccggcgctggacctgacatttaacgatgca
cgcattgaaaaactgttgttccgcttccgcgcccgtaactatcccggcacgctggatgaa
gccgaacagacacgctggttgcagcatcgtcgcgaagccttgaacccagagcgagtgcaa
agctatgtgcaggagctggaaatgctgttcaatcagtatgaaggtgatatcggaaaagaa
aaagatttaaaaatgttatttcagtatgtccaaaatctaactagttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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