KEGG   Erwinia billingiae: EbC_35220
Entry
EbC_35220         CDS       T01270                                 
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
ebi  Erwinia billingiae
Brite
KEGG Orthology (KO) [BR:ebi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ebi03021]
    EbC_35220 (rpoS)
Transcription machinery [BR:ebi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EbC_35220 (rpoS)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 TetR_N phi29_gp9_C
Other DBs
NCBI-ProteinID: CAX61053
UniProt: D8MW46
Position
complement(3918640..3919632)
AA seq 330 aa
MSQNTLKVKDLNEDAEFDENGAEVFDEKALVGNEPADNEIAEDELLSQGATQRVLDATQL
YLGEIGYSPLLTAEEEVFFARRALRGDVPSRRRMIESNLRLVVKIARRYSNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELTHKLDHEPSAEEIAEQLDKPVEDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQAQGLSIEALFRE
NT seq 993 nt   +upstreamnt  +downstreamnt
atgagccagaatacgctgaaagttaaagatctaaatgaagatgcggaattcgacgaaaac
ggagctgaggtttttgatgagaaggctctcgtcggaaatgaacctgctgataacgaaata
gctgaagatgagctgttgtcacaaggtgctacgcaacgagtattggacgcgacgcagctc
tatctgggagagattggttattctcctctgctaacggctgaagaagaagttttcttcgct
cgtcgcgcattacgtggtgatgttccgtctcgtcgccgcatgatcgaaagcaacctgcgt
ttggtagtgaagattgcccgccgttacagcaatcgtggtctggctttgctggatctgatt
gaagaaggtaacctggggttaatccgcgcggtagagaaatttgaccctgaaagagggttc
cgcttctctacttacgctacctggtggattcgccagacgattgaacgggctatcatgaac
caaacccgtaccattcgtttgcctattcatatcgttaaagagctgaacgtctatctccgc
accgcgcgtgaactgacccacaagttagatcatgagccgagtgcagaagaaattgccgaa
cagcttgataaacccgttgaagatgtcagccgtatgctgcgcctcaacgaacgcattaca
tcagtcgacacgccactaggcggtgattctgagaaagcgctgctggatatcctggccgac
gagaaagacaacggtccggaagataccacccaggacgatgacatgaagcagagcatcgtc
aaatggctgttcgaactgaacgccaagcagcgtgaagtgttagcgcgtcgtttcggcctg
ttaggttatgaagcggccacgttagaagatgtgggtcgcgaaattggtctgacccgtgaa
cgtgtccgtcagattcaggttgaaggtctgcgtcgtctgcgtgaaattctgcaggctcag
ggtctgagtatcgaagccctgttccgcgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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