KEGG   Intestinibaculum porci: SG0102_10420
Entry
SG0102_10420      CDS       T05736                                 
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
ebm  Intestinibaculum porci
Pathway
ebm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ebm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SG0102_10420 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ebm03400]
    SG0102_10420 (ruvB)
Enzymes [BR:ebm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SG0102_10420 (ruvB)
DNA repair and recombination proteins [BR:ebm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SG0102_10420 (ruvB)
    RecFOR pathway proteins
     SG0102_10420 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase nSTAND3 AAA_16 AAA_14 AAA_3 DUF815 Sigma54_activ_2 RNA_helicase AAA_22 IstB_IS21 AAA_17 AAA_25 AAA_24 TsaE NB-ARC Parvo_NS1 Bac_DnaA NTPase_1 AAA_18 NACHT AAA_19 AAA_PrkA AAA_11 Rad17
Other DBs
NCBI-ProteinID: BBH26108
UniProt: A0A3G9JPD9
Position
1099773..1100768
AA seq 331 aa
MAEDVLDTKAHREDDEESLRPASFDEYVGQNDLKENLRIFVSAAKKRDESLDHVLLYGPP
GLGKTTMAMIIAHEMGAGIKIVTAPAIDKTGDLVAILTSLSPGDVLFIDEIHRLNKVVEE
VLYPAMEDYCVDVMIGKETPRSVRIDLPPFTLVGATTRAGDLSAPLRDRFGIVSKLDYYN
DEDLTKIISRTSRVYDFAMDDDAKYELARRSRGTPRIANRLFRRVRDFAQFYDDDHISLA
RTQEALDRLKVDNLGLDDVDRRYLLGIINRYGGGPVGLDALAASIGEESVTLEDVYEPYL
LQKGLVKRTHRGRIATQLAYDHFHITREFEE
NT seq 996 nt   +upstreamnt  +downstreamnt
atggctgaagatgttttagatacgaaggcccatcgcgaagacgatgaagaaagtctccgt
ccagcctcgtttgatgaatatgtcggtcaaaatgatcttaaagaaaacttacgcattttc
gtctccgcggcgaaaaaacgtgatgaatcattagatcatgttttactttatggtccacct
ggtttaggaaaaaccactatggcaatgattattgcgcatgaaatgggcgcgggcattaaa
attgtgaccgcaccagccattgataaaacaggtgatttggttgccattttaacatcttta
tcaccaggtgatgttttatttatcgatgaaattcatcgtttaaacaaagttgttgaagaa
gtgctttatccagctatggaagattactgtgtcgatgtgatgatcgggaaagaaacacca
cgcagtgtccgcattgatttaccaccctttactttagtgggggcgacgacgcgagcagga
gatttaagtgctccgctgcgtgatcgttttggcattgtctcgaagttagattactataat
gatgaagacttaacgaagattatctctcgtacgtcccgcgtttatgacttcgcgatggat
gatgatgcaaaatatgaattagcacgtcgttcccgcggaacgccacgtattgccaatcgt
ttattccgccgagtacgagattttgcgcagttttatgatgatgaccacatttcattagcc
cgtacacaggaggcgttggatcgcttaaaagtcgataacttaggcttagatgatgtcgat
cgtcgttatctgcttggcattattaatcgttatggcggcggcccggtcggattagatgcg
ttagcagcgagtattggtgaggaatcggtgacgttagaggatgtatacgaaccgtattta
ttacaaaaaggccttgtcaaaagaacccatcgtggtcgtattgcgacccagctggcctat
gatcattttcatattaccagagaattcgaagaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (30)   
   Pfam (30)   
All databases (39)   

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