KEGG   Escherichia coli B REL606: ECB_01095
Entry
ECB_01095         CDS       T00944                                 
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
ebr  Escherichia coli B REL606
Pathway
ebr03030  DNA replication
ebr03430  Mismatch repair
ebr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ebr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ECB_01095 (holB)
   03430 Mismatch repair
    ECB_01095 (holB)
   03440 Homologous recombination
    ECB_01095 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ebr03032]
    ECB_01095 (holB)
   03400 DNA repair and recombination proteins [BR:ebr03400]
    ECB_01095 (holB)
Enzymes [BR:ebr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ECB_01095 (holB)
DNA replication proteins [BR:ebr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ECB_01095 (holB)
DNA repair and recombination proteins [BR:ebr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ECB_01095 (holB)
SSDB
Motif
Pfam: DNApol3-delta_C DNA_pol3_delta2 HolB_lid EPF
Other DBs
NCBI-ProteinID: ACT38777
Position
1170331..1171335
AA seq 334 aa
MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG
HCRGCQLMQAGTHPDYYTLAPEKGKNALGIDAVREVTEKLNEHARLGGAKVVWVTDAALL
TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV
TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQ
APARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQL
MSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgagatggtatccatggttacgacctgatttcgaaaaactggtagccagctatcaggcc
ggaagaggtcaccatgcgctgctcattcaggcgttaccgggcatgggcgatgatgcttta
atctacgccctgagccgttatttactctgccaacaaccgcagggtcacaaaagttgcggt
cactgtcgtggatgtcagttgatgcaggctggcacgcatcccgattactacaccctggct
cccgaaaaagggaaaaatgcgttgggcattgatgcggtacgtgaggtcaccgaaaagctg
aatgagcacgcacgcttaggtggtgcgaaagttgtctgggtaaccgatgctgccttacta
accgacgccgcggctaacgcattgctgaaaacgcttgaagagccaccagcagaaacctgg
tttttcctggctacccgcgagcctgaacgtttactggcaacattacgtagtcgttgtcgg
ttacattaccttgcgccgccgccggaacagtacgccgtgacctggctttcacgcgaagtg
acaatgtcacaggatgcattacttgccgcattgcgcttaagcgccggttcgcctggcgcg
gcactggcgttgtttcagggagataactggcaggctcgtgaaacattgtgtcaggcgttg
gcatatagcgtaccatcgggcgactggtattcgctgctggcggcccttaatcatgaacaa
gctccggcgcgtttacactggctggcaacgttgctgatggatgcgctaaaacgccatcat
ggcgctgcgcaggtgaccaatgttgatgtgccgggcctggtcgccgaactggcaaaccat
ctttctccctcgcgcctgcaggctatactgggggatgtttgccacattcgtgaacagtta
atgtctgtcacaggcatcaaccgcgagcttctcatcaccgatcttttactgcgtattgag
cattacctgcaaccgggcgttgtgctaccggttcctcatctttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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