KEGG   Escherichia coli B REL606: ECB_01133
Entry
ECB_01133         CDS       T00944                                 
Symbol
ymfC
Name
(GenBank) 23S rRNA pseudouridine synthase
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
ebr  Escherichia coli B REL606
Brite
KEGG Orthology (KO) [BR:ebr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ebr03009]
    ECB_01133 (ymfC)
Enzymes [BR:ebr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     ECB_01133 (ymfC)
Ribosome biogenesis [BR:ebr03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    ECB_01133 (ymfC)
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: ACT38814
Position
complement(1209667..1210320)
AA seq 217 aa
MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILFNKPYDVLPQFTDEAGR
KTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGFPTQD
AIEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQV
RRMTAHVGFPTLRLIRYAMGDYTLDNLANGEWREATE
NT seq 654 nt   +upstreamnt  +downstreamnt
atgcggcaattcataatctctgaaaataccatgcaaaaaacttcttttagaaatcaccag
gttaagcgattcagctcgcaacgttctaccaggcgtaaacctgaaaaccagcccacgcgt
gtgatcctcttcaataaaccctacgatgttcttccgcagttcaccgatgaagccggacgc
aaaacattaaaagaattcatcccggttcagggcgtttatgcagcaggtcgtcttgaccgc
gatagcgaagggttactggtgctgaccaataacggcgcgttgcaggcgcgtttaacccag
ccgggtaaacgcaccggaaaaatctattatgtgcaggtggaaggttttcccacgcaagac
gcaattgaagccttgcgcaatggcgtaaccttaaatgatggccctaccctgcccgcaggc
gcggagctggttgacgaacccgcgtggttatggccgcggaatccaccaattcgtgaacgc
aaaagtattcccaccagctggctgaagatcaccttatatgaaggacgtaatcgccaggtg
cgccgcatgaccgcccatgttggcttccccacgctgcgactgattcgttatgcgatgggt
gattacactttggataaccttgccaatggcgaatggcgagaagcaacagaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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