KEGG   Enterobacteriaceae bacterium S05: CUC76_18465
Entry
CUC76_18465       CDS       T05725                                 
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
ebu  Enterobacteriaceae bacterium S05
Pathway
ebu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ebu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CUC76_18465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ebu03019]
    CUC76_18465
   03009 Ribosome biogenesis [BR:ebu03009]
    CUC76_18465
Messenger RNA biogenesis [BR:ebu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CUC76_18465
Ribosome biogenesis [BR:ebu03009]
 Prokaryotic type
  rRNA helicases
   CUC76_18465
SSDB
Motif
Pfam: DEAD Helicase_C DbpA DeaD_C ResIII CMS1 DRTGG AAA_22
Other DBs
NCBI-ProteinID: AWB63423
Position
3700130..3702061
AA seq 643 aa
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAF
SLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLSKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPTAEGEELD
VETLAAALLKMAQGERSLIVPPDAPMRPRREFRDRDDRFERRGDRNDRAPRGDREDRPKR
ERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMP
GEVLQHFTRTRILNKPMNMQLLGDAQPRTERRGGGERREGGRSFGGERREGGRGFGGERR
EGGRGDGRRFSGERREGRAPRRDDASAPRRDDSAGRRRFGGDA
NT seq 1932 nt   +upstreamnt  +downstreamnt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcg
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgcattccgcatctg
ctggacggccgcgacgttctgggtatggcccagaccggtagcggtaaaaccgcagcgttt
tctttaccgctgctgaacaacatcgatcctgagctgagagcaccacagatcctggtgctg
gcgccgacccgcgagctggcggtacaggttgctgaagcaatgacggaattctctaaacat
atgcgcggcgtaaacgtggttgccctgtacggcggccagcgttatgacgtgcagctgcgc
gccctgcgtcagggtccgcagatcgttgtcggtaccccgggtcgtctgctggaccacctg
aagcgcggcaccctggacctctctaaactgagcggtctggtactggatgaagcagatgaa
atgctgcgcatgggctttatcgaagacgtagaaaccattatggcgcagatcccggaaggg
catcagaccgcgctgttctccgccaccatgccggaagcgatccgtcgcattacccgccgc
tttatgaaagagccgcaggaagtgcgtattcagtccagcgtgaccactcgtccggacatc
agccagagctactggactgcctacggtatgcgtaaaaacgaagcgctggtgcgtttcctg
gaagcggaagattttgatgcggcgattatcttcgtccgtaccaaaaacgcgaccctggaa
gtggctgaagcgctggagcgtaacggctacaacagcgcggcgctgaacggcgacatgaac
caggcgctgcgtgagcagaccctggagcgtctgaaagacggtcgtctggatatcctgatt
gcgactgacgtggcagcccgtggtctggacgttgaacgtatcagcctggtggtgaactac
gacatcccgatggattctgaatcttacgttcaccgtatcggtcgtaccggtcgtgcgggc
cgcgcgggccgcgcgttgctgttcgttgagaaccgtgaacgtcgtctgctgcgcaacatc
gaacgtacgatgaagctgaccatcccggaagtggagctgccgaacgcagagctgctgagc
aaacgtcgtctggaaaaattcgccgccaaagtccagcagcagctggaaagcagcgatctg
gaccagtaccgtgcgctgctggcgaaaatccagccgacggcggaaggcgaagagctggac
gtggaaacgctggctgccgcgctgctgaaaatggcccagggcgaacgctcgctgatcgtg
ccgccggatgcgccgatgcgtccgcgtcgtgagttccgtgaccgtgacgatcgcttcgag
cgtcgtggcgaccgcaacgatcgcgctccgcgtggcgatcgcgaagatcgtccgaagcgt
gagcgtcgtgacgtaggcgatatggaactgtatcgcattgaagtgggtcgcgatgacggt
gttgaagtgcgtcatatcgttggcgcgatcgctaatgaaggcgatatcagcagccgctac
atcggtaacatcaagctgttcgcttctcactccaccatcgaactgccgaaagggatgccg
ggcgaagtgctgcagcactttactcgtacccgcatcctgaacaagccgatgaacatgcag
ctgctgggcgatgcgcagccgcgcaccgaacgtcgtggcggtggtgaacgtcgtgaaggc
ggtcgtagcttcggcggtgagcgtcgtgaaggcggtcgtggcttcggtggcgagcgtcgt
gaaggtggtcgtggtgatggtcgtcgtttcagcggcgaacgtcgtgaaggccgtgcgccg
cgtcgtgacgatgcatccgcgccgcgccgcgatgactctgccggtcgccgtcgcttcggt
ggcgatgcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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