KEGG   Empedobacter brevis: F0358_13280
Entry
F0358_13280       CDS       T06196                                 
Name
(GenBank) intradiol ring-cleavage dioxygenase
  KO
K00449  protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
Organism
ebv  Empedobacter brevis
Pathway
ebv00362  Benzoate degradation
ebv01100  Metabolic pathways
ebv01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:ebv00001]
 09100 Metabolism
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    F0358_13280
   00624 Polycyclic aromatic hydrocarbon degradation
    F0358_13280
Enzymes [BR:ebv01000]
 1. Oxidoreductases
  1.13  Acting on single donors with incorporation of molecular oxygen (oxygenases)
   1.13.11  With incorporation of two atoms of oxygen
    1.13.11.3  protocatechuate 3,4-dioxygenase
     F0358_13280
SSDB
Motif
Pfam: Dioxygenase_C DUF5677
Other DBs
NCBI-ProteinID: QES93620
Position
complement(2788086..2789315)
AA seq 409 aa
MKKIMRCNILLLCLLFVSCNGQTNEKVQKETTAIVGGGCDGCELMYIGMPEEISSVSTSP
GWNEKGQKLIVTGTVFQPDGKTPAPNVILYYWQTDAGGYYTPKPEMEERTKRHGYIRGWV
KTGVNGKYSIKTIRPAPYPDEDSPAHIHLSVKEPDIANEYYTDEIHFDDDKLLIPYKKKN
KLENRGGSGIVRILLQDSLQIAEHDIVLGLNIPNYPKKVTADISSGLSIGEDQPSFVPFH
AFGPDKGTQTCPVCKYGRYHGILYFVGNYPDWTAIKKWLQFLEQESEKRKHYLKVYFVYG
NESKYSKKQRQKELEQIGKELNIKNTALTFVPSFSDKATEADLNKINPDVQNTFIIYKHR
SIVDKYINLKPTHENFNMLSDALDQTQGDYFHLPEPEAHGLNRGRMFKP
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgaaaaaaataatgcgttgcaacatcctgttgctgtgcctgttgtttgtaagctgcaac
gggcagaccaatgaaaaagtacaaaaagaaacgacagccattgtaggaggtggctgcgat
ggctgcgaactgatgtacattggcatgcctgaagaaatttcttctgttagcacaagtccc
ggatggaatgaaaaaggacaaaaactaatcgttaccggaaccgtttttcaacccgatggc
aaaacacccgcgccaaatgttatcctctattattggcagaccgatgccggcggttactat
acaccgaaacccgaaatggaggaaagaaccaaacgacacggctatatccgcggttgggta
aaaaccggtgtaaacggaaagtattccataaaaaccatacgtcccgcgccttatccggat
gaggactcgccggcgcatattcacctgtccgtcaaagaacctgatatagccaacgaatat
tataccgacgaaatccattttgatgatgataaactgcttatcccgtataaaaagaaaaac
aagctcgaaaacaggggcggaagcggtattgtacgcatcttgctgcaagacagcctgcag
attgccgagcacgacatcgtgctgggtttaaacattccgaattatcccaaaaaagtaaca
gctgacatctcatccgggttaagtataggcgaagaccagccctcttttgtgccttttcat
gctttcggacccgataaaggaacccaaacctgtcccgtctgcaaatacggtcgctatcac
ggtattctgtattttgtgggcaactatcccgattggacagccataaaaaaatggttgcag
tttttagaacaggaaagtgaaaaacgcaaacactacctgaaagtctattttgtgtatgga
aatgagagcaagtacagcaaaaagcaacgacaaaaagaattggagcaaataggaaaggaa
ctcaacatcaaaaacacagccctgacgtttgtgccgtccttttcggataaagcaaccgaa
gccgacctgaataaaatcaatcccgatgtacaaaatacctttatcatttacaaacacaga
agcattgtagacaagtatatcaacctgaaaccaacacatgaaaatttcaacatgctgtct
gatgcgttagaccaaacacaaggcgattatttccatttacccgagcccgaagcccacggt
ttaaaccgtgggcgaatgtttaaaccgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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