Entry
Name
(phenol)carboxyphthiodiolenone synthase;
ppsABCDE (gene names)
Class
Transferases;
Acyltransferases;
Transferring groups other than aminoacyl groups
BRITE hierarchy
Sysname
(methyl)malonyl-CoA:long-chain acyl-[(phenol)carboxyphthiodiolenone synthase] (methyl)malonyltransferase {carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase]-forming}
Reaction(IUBMB)
(1) 3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + icosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH = C32-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O;
(2) 3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + docosanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH = C34-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O;
(3) 3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 19-(4-hydroxyphenyl)-nonadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH = C37-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O;
(4) 3 malonyl-CoA + 2 (S)-methylmalonyl-CoA + 17-(4-hydroxyphenyl)heptadecanoyl-[(phenol)carboxyphthiodiolenone synthase] + 5 NADPH = C35-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase] + 5 CoA + 5 NADP+ + 5 CO2 + 2 H2O
Substrate
malonyl-CoA [CPD:
C00083 ];
(S)-methylmalonyl-CoA [CPD:
C00683 ];
icosanoyl-[(phenol)carboxyphthiodiolenone synthase] [CPD:
C22226 ];
NADPH [CPD:
C00005 ];
docosanoyl-[(phenol)carboxyphthiodiolenone synthase];
19-(4-hydroxyphenyl)-nonadecanoyl-[(phenol)carboxyphthiodiolenone synthase];
17-(4-hydroxyphenyl)heptadecanoyl-[(phenol)carboxyphthiodiolenone synthase]
Product
C32-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase];
CoA [CPD:
C00010 ];
NADP+ [CPD:
C00006 ];
CO2 [CPD:
C00011 ];
H2O [CPD:
C00001 ];
C34-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase];
C37-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase];
C35-(phenol)carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase]
Comment
The enzyme, which is a complex of five polyketide synthase proteins, is involved in the synthesis of the lipid core common to phthiocerols and phenolphthiocerols. The first protein, PpsA, can accept either a C18 or C20 long-chain fatty acyl, or a (4-hydroxyphenyl)-C17 or C19 fatty acyl. The substrates must first be adenylated by EC
6.2.1.59 , long-chain fatty acid adenylase/transferase FadD26, which also loads them onto PpsA. PpsA then extends them using a malonyl-CoA extender unit. The PpsB protein adds the next malonyl-CoA extender unit. The absence of a dehydratase and an enoyl reductase domains in the PpsA and PpsB modules results in the formation of the diol portion of the phthiocerol moiety. PpsC adds a third malonyl unit (releasing a water molecule due to its dehydratase domain), PpsD adds an (R)-methylmalonyl unit, releasing a water molecule, and PpsE adds a second (R)-methylmalonyl unit, without releasing a water molecule. The incorporation of the methylmalonyl units results in formation of two branched methyl groups in the elongated product. The enzyme does not contain a thioesterase domain [2], and release of the products requires the tesA-encoded type II thioesterase [1].
History
EC 2.3.1.292 created 2019
Orthology
K12440 phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase A
K12441 phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase B
K12442 phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase C
K12443 phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D
K12444 phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase E
Genes
MTU : Rv2931(ppsA) Rv2932(ppsB) Rv2933(ppsC) Rv2934(ppsD) Rv2935(ppsE)
MTV : RVBD_2931 RVBD_2932 RVBD_2933 RVBD_2934 RVBD_2935
MTC : MT3000 MT3002 MT3003 MT3004 MT3005
MRA : MRA_2957(ppsA) MRA_2958(ppsB) MRA_2959(ppsC) MRA_2960(ppsD) MRA_2961(ppsE)
MTF : TBFG_12945 TBFG_12946 TBFG_12947 TBFG_12948 TBFG_12949
MTB : TBMG_01037 TBMG_01038 TBMG_01039 TBMG_01040 TBMG_01041
MTK : TBSG_01045 TBSG_01046 TBSG_01047 TBSG_01048 TBSG_01049
MTZ : TBXG_001025 TBXG_001026 TBXG_001027 TBXG_001028 TBXG_001029
MTG : MRGA327_18005 MRGA327_18040
MTI : MRGA423_18145 MRGA423_18200
MTE : CCDC5079_2690 CCDC5079_2691 CCDC5079_2692 CCDC5079_2693 CCDC5079_2694 CCDC5079_2695
MTUR : CFBS_3089(ppsA) CFBS_3090(ppsB) CFBS_3091(ppsC) CFBS_3092(ppsD) CFBS_3093(ppsE)
MTL : CCDC5180_2655 CCDC5180_2656 CCDC5180_2657 CCDC5180_2658 CCDC5180_2659
MTO : MTCTRI2_2988(ppsA) MTCTRI2_2989(ppsB) MTCTRI2_2990(ppsC) MTCTRI2_2991(ppsD) MTCTRI2_2992(ppsE)
MTD : UDA_2931(ppsA) UDA_2932(ppsB) UDA_2933(ppsC) UDA_2934(ppsD) UDA_2935(ppsE)
MTN : ERDMAN_3212 ERDMAN_3214(ppsB) ERDMAN_3215(ppsC) ERDMAN_3216(ppsD) ERDMAN_3217(ppsE)
MTJ : J112_15685 J112_15690 J112_15695 J112_15700 J112_15705 J112_15710
MTUB : MT7199_2965 MT7199_2966(ppsB) MT7199_2967 MT7199_2968 MT7199_2969
MTUC : J113_20330 J113_20385 J113_20410
MTUE : J114_15645 J114_15650 J114_15655 J114_15670 J114_15675
MTX : M943_15125 M943_15130 M943_15135
MTUL : TBHG_02860 TBHG_02861 TBHG_02862 TBHG_02865 TBHG_04117
MTUT : HKBT1_3077(ppsA) HKBT1_3078(ppsB) HKBT1_3079(ppsC) HKBT1_3080(ppsD) HKBT1_3081(ppsE)
MTUU : HKBT2_3082(ppsA) HKBT2_3083(ppsB) HKBT2_3084(ppsC) HKBT2_3085(ppsD) HKBT2_3086(ppsE)
MTQ : HKBS1_3084(ppsA) HKBS1_3085(ppsB) HKBS1_3086(ppsC) HKBS1_3087(ppsD) HKBS1_3088(ppsE)
MBO : BQ2027_MB2956(ppsA) BQ2027_MB2957(ppsB) BQ2027_MB2958(ppsC) BQ2027_MB2959(ppsD) BQ2027_MB2960(ppsE)
MBB : BCG_2953(ppsA) BCG_2954(ppsB) BCG_2955(ppsC) BCG_2956(ppsD) BCG_2957(ppsE)
MBT : JTY_2948(ppsA) JTY_2949(ppsB) JTY_2950(ppsC) JTY_2951(ppsD) JTY_2952(ppsE)
MBM : BCGMEX_2948(ppsA) BCGMEX_2949(ppsB) BCGMEX_2950(ppsC) BCGMEX_2951(ppsD) BCGMEX_2952(ppsE)
MBK : K60_030360 K60_030370 K60_030380 K60_030390 K60_030400
MBX : BCGT_2769 BCGT_2770 BCGT_2771 BCGT_2772 BCGT_2773
MAF : MAF_29360(ppsA) MAF_29370(ppsB) MAF_29380(ppsC) MAF_29390(ppsD) MAF_29400(ppsE)
MMIC : RN08_3228 RN08_3230 RN08_3232 RN08_3233 RN08_3234
MCE : MCAN_29531(ppsA) MCAN_29541(ppsB) MCAN_29551(ppsC) MCAN_29561(ppsD) MCAN_29571(ppsE)
MCQ : BN44_60408(ppsA) BN44_60409(ppsB) BN44_60410(ppsC) BN44_60411(ppsD) BN44_60412(ppsE)
MCV : BN43_40639(ppsA) BN43_40640(ppsB) BN43_40641(ppsC) BN43_40642(ppsD) BN43_40643(ppsE)
MCX : BN42_40929(ppsA) BN42_40930(ppsB) BN42_40931(ppsC) BN42_40932(ppsD) BN42_40933(ppsE)
MCZ : BN45_51343(ppsA) BN45_51344(ppsB) BN45_51345(ppsC) BN45_51346(ppsD) BN45_51347(ppsE)
MORY : MO_003064(ppsB) MO_003065(ppsC) MO_003066(ppsD) MO_003067(ppsE)
MLE : ML2353 ML2354 ML2355 ML2356 ML2357
MLB : MLBr02353 MLBr02354 MLBr02355 MLBr02356 MLBr02357
MSA : Mycsm_05875 Mycsm_05876 Mycsm_05877 Mycsm_05878
MUL : MUL_2015(ppsE) MUL_2016(ppsD) MUL_2017(ppsC) MUL_2018(ppsB) MUL_2019(ppsA)
MMI : MMAR_1772(ppsE) MMAR_1773(ppsD) MMAR_1774(ppsC) MMAR_1775(ppsB) MMAR_1776(ppsA)
MMAE : MMARE11_16920(ppsE) MMARE11_16930(ppsD) MMARE11_16940(ppsC) MMARE11_16960(ppsA)
MLI : MULP_01928(ppsE) MULP_01929(ppsD) MULP_01931(ppsC) MULP_01932(ppsB) MULP_01933(ppsA)
MPSE : MPSD_40560 MPSD_40600(ppsC) MPSD_40610(ppsD) MPSD_40620(ppsE)
MSHO : MSHO_54640 MSHO_54650(ppsB) MSHO_54660(ppsC) MSHO_54670(ppsD) MSHO_54680(ppsE)
MMC : Mmcs_2832 Mmcs_2833 Mmcs_2834 Mmcs_2835
MKM : Mkms_2876 Mkms_2877 Mkms_2878 Mkms_2879
MJL : Mjls_2861 Mjls_2865 Mjls_2866
MKN : MKAN_08430 MKAN_24020 MKAN_24025 MKAN_24030 MKAN_24035 MKAN_24040
MHAD : B586_03495 B586_03500 B586_03505 B586_03510 B586_03515
MDX : BTO20_18125 BTO20_18130 BTO20_18135 BTO20_18140
MSHG : MSG_01627(ppsE) MSG_01628 MSG_01629(ppsC) MSG_01630(ppsB)
MFJ : MFLOJ_16760(ppsB) MFLOJ_16770(ppsC) MFLOJ_16780(ppsD) MFLOJ_16790(ppsE)
MSTO : MSTO_18320(ppsB) MSTO_18350 MSTO_18360 MSTO_18380(ppsE)
MSIM : MSIM_07720 MSIM_07730 MSIM_07750(ppsC) MSIM_07760(ppsD) MSIM_07770(ppsE)
MLW : MJO58_08810 MJO58_08815 MJO58_08820 MJO58_08825
MPAG : C0J29_10310 C0J29_10315 C0J29_10320 C0J29_10325 C0J29_10330
MNM : MNVM_38360(ppsA_2) MNVM_38370(ppsB) MNVM_38380 MNVM_38390 MNVM_38400 MNVM_38410(ppsE)
MCOO : MCOO_18270(ppsE) MCOO_18280(ppsD) MCOO_18290 MCOO_18300(ppsB) MCOO_18310(ppsA_1)
MBAI : MB901379_01589(ppsE_1) MB901379_01590(ppsC_2) MB901379_01591(ppsC_3) MB901379_01592(ppsB) MB901379_01593(ppsA_1)
MGAU : MGALJ_49400(ppsB) MGALJ_49410(ppsE)
MLJ : MLAC_28670(ppsA) MLAC_28680(ppsB) MLAC_28690(ppsC) MLAC_28700(ppsD) MLAC_28710(ppsE)
MSHJ : MSHI_07320(ppsE) MSHI_07330(ppsD) MSHI_07340(ppsC) MSHI_07350(ppsB)
MMAM : K3U93_07825 K3U93_07830 K3U93_07835 K3U93_07840 K3U93_07845
MSPG : F6B93_07145 F6B93_07150 F6B93_07155 F6B93_07160 F6B93_07165
MOT : LTS72_15930 LTS72_15935 LTS72_15940 LTS72_15945 LTS72_15950
MLM : MLPF_2695(ppsE) MLPF_2696(ppsD) MLPF_2697(ppsC) MLPF_2698(ppsB) MLPF_2699(ppsA)
MPAA : MKK62_06575 MKK62_06580 MKK62_06585 MKK62_06590 MKK62_06595
MMEH : M5I08_15220 M5I08_15225 M5I08_15255 M5I08_15315 M5I08_15320 M5I08_15335
MWU : PT015_10805 PT015_10810 PT015_10815 PT015_10820 PT015_10825
MVA : Mvan_3123 Mvan_3124 Mvan_3125 Mvan_3126 Mvan_3128
MGI : Mflv_3390 Mflv_3391 Mflv_3392 Mflv_3393 Mflv_3395
MSP : Mspyr1_27210 Mspyr1_27220 Mspyr1_27230 Mspyr1_27240 Mspyr1_27260
MCB : Mycch_2760 Mycch_2762 Mycch_2763 Mycch_2764 Mycch_2765
MVQ : MYVA_2946 MYVA_2948 MYVA_2950 MYVA_2951(ppsD) MYVA_2952(ppsE)
MDU : MDUV_13110(ppsE) MDUV_13120(ppsD) MDUV_13130(ppsB_1) MDUV_13140(ppsB_2) MDUV_13160 MDUV_13170
MAUU : NCTC10437_03018(ppsE_2) NCTC10437_03019(ppsB_2) NCTC10437_03020(ppsB_3) NCTC10437_03021(ppsB_4) NCTC10437_03023(ppsA_1)
MPSC : MPSYJ_36560(ppsE) MPSYJ_36570(ppsD) MPSYJ_36580 MPSYJ_36590 MPSYJ_36610(ppsA)
MPOF : MPOR_33390(ppsA_1) MPOR_33410(ppsB_1) MPOR_33420(ppsB_2) MPOR_33430(ppsD) MPOR_33440(ppsE)
MSEI : MSEDJ_33320(ppsE) MSEDJ_33330(ppsD) MSEDJ_33340(ppsA_1) MSEDJ_33350
MMON : EWR22_15015 EWR22_15020 EWR22_15025 EWR22_15030
MRF : MJO55_13950 MJO55_13960 MJO55_13965 MJO55_13970 MJO55_13975
MAUS : JN090_14900 JN090_14905 JN090_14915 JN090_14925
MKR : MKOR_16500(ppsE) MKOR_16510(ppsD) MKOR_16520 MKOR_16530 MKOR_16540 MKOR_16550
MPAK : MIU77_12300 MIU77_12305 MIU77_12320
MJD : JDM601_2211(ppsE) JDM601_2212(ppsD) JDM601_2213(ppsD) JDM601_2214(ppsA) JDM601_2215
MTER : 4434518_02133(ppsE) 4434518_02134(ppsD_1) 4434518_02135(ppsD_2) 4434518_02136(ppsA_2) 4434518_02137(ppsA_3)
MMIN : MMIN_38080(ppsE) MMIN_38090(ppsD) MMIN_38100 MMIN_38110(ppsB) MMIN_38120(ppsA)
MHIB : MHIB_16590(ppsE) MHIB_16600(ppsD) MHIB_16610 MHIB_16620(ppsB) MHIB_16640
MHER : K3U94_12440 K3U94_12445 K3U94_12450 K3U94_12455 K3U94_12460
MVM : MJO54_12385 MJO54_12390 MJO54_12395 MJO54_12400 MJO54_12405
GOI : LK459_21375 LK459_21380 LK459_21385 LK459_21390 LK459_21395
TPUL : TPB0596_38070(ppsE) TPB0596_38080(ppsD) TPB0596_38090(ppsB_1) TPB0596_38100(ppsB_2) TPB0596_38120
SDV : BN159_2139 BN159_2140(ppsD) BN159_2141(ppsC) BN159_2142
SCOA : QU709_01725 QU709_01730
ACTW : F7P10_16280 F7P10_16315
AMYY : YIM_33630(ppsA4) YIM_42700(ppsA7)
AMOG : QRX60_21550 QRX60_34170
AMYZ : HUW46_01291 HUW46_01447 HUW46_08650
ANW : QP939_24725 QP939_44080
KPHY : AOZ06_25910 AOZ06_30725
ACTU : Actkin_02680(ppsA_5)
» show all
Taxonomy
Reference
Authors
Rao A, Ranganathan A
Title
Interaction studies on proteins encoded by the phthiocerol dimycocerosate locus of Mycobacterium tuberculosis.
Journal
Reference
Authors
Trivedi OA, Arora P, Vats A, Ansari MZ, Tickoo R, Sridharan V, Mohanty D, Gokhale RS
Title
Dissecting the mechanism and assembly of a complex virulence mycobacterial lipid.
Journal
Sequence
Other DBs
ExPASy - ENZYME nomenclature database: 2.3.1.292