Entry
Name
cullin-RING-type E3 NEDD8 transferase;
RBX1 (gene name)
Class
Transferases;
Acyltransferases;
Aminoacyltransferases
BRITE hierarchy
Sysname
[E2 NEDD8-conjugating enzyme]-S-[NEDD8-protein]-yl-L-cysteine:[cullin] [NEDD8-protein] transferase (isopeptide bond-forming; RING-type)
Reaction(IUBMB)
[E2 NEDD8-conjugating enzyme]-S-[NEDD8-protein]-yl-L-cysteine + [cullin]-L-lysine = [E2 NEDD8-conjugating enzyme]-L-cysteine + [cullin]-N6-[NEDD8-protein]-yl-L-lysine
Substrate
[E2 NEDD8-conjugating enzyme]-S-[NEDD8-protein]-yl-L-cysteine;
[cullin]-L-lysine
Product
[E2 NEDD8-conjugating enzyme]-L-cysteine;
[cullin]-N6-[NEDD8-protein]-yl-L-lysine
Comment
Some RING-type E3 ubiquitin transferase (EC
2.3.2.27 ) are not able to bind a substrate protein directly. Instead, they form a complex with a cullin scaffold protein and a substrate recognition module, which is named CRL for Cullin-RING-Ligase. The cullin protein needs to be activated by the ubiquitin-like protein NEDD8 in a process known as neddylation. The transfer of NEDD8 from a NEDD8-specific E2 enzyme onto the cullin protein is a secondary function of the RING-type E3 ubiquitin transferase in the CRL complex. The process requires auxiliary factors that belong to the DCN1 (defective in cullin neddylation 1) family.
History
EC 2.3.2.32 created 2017
Orthology
K03868 E3 ubiquitin-protein ligase RBX1
Genes
PPS : 100970959 100981636(RBX1)
PTEH : 111532697 111548968(RBX1)
CJC : 100391523(RBX1) 103796394
ANAN : 105716995 105721831(RBX1)
PLEU : 114694298(Rbx1) 114707186
MORG : 121444018 121461000(Rbx1)
MFOT : 126492120 126501446
PLOP : 125350718 125358037(Rbx1)
NVS : 122892604(RBX1) 122902420
ZCA : 113911560 113921968(RBX1)
HHV : 120234320(RBX1) 120234672 120236827
CHX : 102187112(RBX1) 102188771
BTAX : 128047495(RBX1) 128067535
CCAD : 122423474(RBX1) 122426581 122445122
BMUS : 118888805 118902305(RBX1)
OOR : 101287254(RBX1) 101289349
PCAD : 102989901 112064697 129391324(RBX1)
PSIU : 116749210 116760644(RBX1)
MYB : 102243164 102243482 102254932 102260998(RBX1)
MMYO : 118650853(RBX1) 118659026 118663966 118663967
MDT : 132216300 132217262 132226912(RBX1) 132234256 132240300
MMF : 118618357 118624414(RBX1)
SARA : 101542238(RBX1) 101554111
SETR : 126006345(RBX1) 126032651
ETF : 101646762(RBX1) 101662489
TSR : 106537822(RBX1) 106553210
PRAF : 128420865 128422195(RBX1)
XLA : 108714482(rbx1.L) 108715730(rbx1.S)
SANH : 107672143(rbx1) 107695112
SGH : 107580054 107602336(rbx1)
CAUA : 113046818 113047604
CGIB : 127945830 127953577
MASI : 127450052 127452336
IPU : 100528272(rbx1) 108279000 108279790
IFU : 128615623(rbx1) 128622163
AMEX : 107197156 125799446
TRU : 101079814 115248454 115249889 115249890
PLEP : 121956973(rbx1) 121966503
ASTR : 137594248 137608702 137609908
SASA : 100136424(rbx1) 106601243(rbx1)
STRU : 115171287 115199956
OTW : 112226161 112247600 112258810
OMY : 100301858(rbx1) 110486413
OKI : 109864917 109898526 109898577
SALP : 111965561 111981970 112072990
CCLU : 121550972 121569034
SFM : 108926071(rbx1) 108939936 108939944
PKI : 111845210(rbx1) 111853244
AANG : 118216689(rbx1) 118218515
HOC : 132820883 132831298(rbx1)
LRJ : 133340675(RBX1) 133360292 133360954
DME : Dmel_CG16982(Roc1a) Dmel_CG16988(Roc1b)
DSI : Dsimw501_GD11014(Dsim_GD11014) Dsimw501_GD16520(Dsim_GD16520)
DYA : Dyak_GE16630 Dyak_GE17622 Dyak_GE21084
DAN : 6496786 6500186 6504852
DSR : 110178156 110181408 110181527 110181780
DPO : 4814059 6898356 6901854 6902120
DPE : 6590337 6597670 6599516 6600097
DMN : 108151726 108157979 108158743 108164784
DWI : 124461521 124461729 124461882 124461913 6638168 6642959 6644881 6645940 6652807 6653602
DGR : 6558239 6559441 6562654 6569282
DMO : Dmoj_GI14277 Dmoj_GI16422 Dmoj_GI16738 Dmoj_GI20142 Dmoj_GI25778
DAZ : 108609727 108613301 108618888 108620113
DNV : 108651181 108655043 108656193 115562720
DHE : 111601088 111603518 111604779 111605125
DVI : 6622041 6626811 6634529 6635721
CCAT : 101452937 101454374
BOD : 106621760 106627011 118679759 118681423
RZE : 108368697 108368698 108377436 108382225
TDA : 119661908 119669149 119671315 119671343 119671347 119672072 119677018 119679884 119680239 119685952 119685953 119687493 119688891 119689574 119689652
MDE : 101897666 101900642 131800338
CLON : 129605516 129617551
AMER : 121594544 121601593
AALB : 109423057 109432379 115260693
ASUA : 134209161 134209169
CFEL : 113372136 113373331
AGS : 114120761 114122273 114123391
ACOO : 126836636 126840653
DCI : 103511407 103524839 103524844
SGRE : 126315376 126354682
DPX : DAPPUDRAFT_40730 DAPPUDRAFT_60651 DAPPUDRAFT_65504 DAPPUDRAFT_65506 DAPPUDRAFT_65509
AFRA : 136038535 136038991 136038992 136038993
PPOI : 119099374 119099407 119105838 119105852
CSCU : 111619728 111633535 111638739 111640208
CVS : 136982268(Roc1a) 136982293
CBR : CBG_19342(Cbr-rbx-1)
BMY : BM_BM14000(Bma-rbx-1)
ATH : AT3G42830 AT5G20570(RBX1)
CSAT : 104706402 104710838 104736126 104770432 104780213 104790623
BRP : 103845664 103851357 103856451
BNA : 106371726 106385158 106408993 106425686 111213972
BOE : 106316076 106325067 106332287
RSZ : 108817515 108827876 108846167 130509350
THJ : 104808880 104811002 104815338 104826593
CIC : CICLE_v10009952mg CICLE_v10026815mg
MINC : 123193858 123200043
GRA : 105767665 105792942 105795701
GHI : 107903283 107929974 107932188 107932799 107960807 121204775
GAB : 108468083 108469121 108488019
HSYR : 120114829 120149883 120156633 120167838 120179762 120193390 120211863 120218694
DZI : 111274703 111286458 111299190 111303054
EGR : 104436408 104437993 104439002
GMX : 100500045 100526919 100789570 100798515
GSJ : 114374500 114378027 114378451 114397039 114417297
VRA : 106754365 106761091 106761707
VUM : 124820988 124829759 124829763
CCAJ : 109790424 109806089
APRC : 113855424 113858391
TPRA : 123899636 123899965 123920291
PSAT : 127086751 127105727
VVO : 131601747 131626399 131629058
LJA : 130747013 130749032 130749219
ADU : 107462077 107477744 127744049
AIP : 107613945 107624456 107629957
AHF : 112707013 112737543 112771395 112789617
LANG : 109325667 109352320 109353407
PCIN : 129309176 129320352
QSA : O6P43_002658 O6P43_018413 O6P43_022498 O6P43_027535
FVE : 101301042 101302106 101307444
AANS : 126795624 126801715 126802014
RCN : 112174210 112179375 112196401 112199925
PMUM : 103331948 103331952
PAVI : 110746319 110748081 110769275
PDUL : 117617435 117619981
MDM : 103405253 103439121 103450248
MSYL : 126613785 126613786 126628536
MCHA : 111016444 111021926
CMAX : 111465785 111467761 111485682
CMOS : 111440096 111444049 111461500
CPEP : 111779645 111793107 111798730
MEAN : 126667731 126667732 126683098
HBR : 110634308 110639647 110664598
MESC : 110612954 110626830
POP : 18094715 18100330 7471662
PALZ : 118034841 118037983 118048083
PNZ : 133672759 133688128 133700613
CILL : 122304274 122307828
CAVE : 132166206 132166306
AGLU : 133857147 133857303
TWL : 119982225 119992954 120005634
SPEN : 107005489 107021447
SOT : 102583049 102595356 107059797
SSTN : 125857671 125862246 125872505
SDUL : 129871323 129899417
CANN : 107840900 107861671 107876064
LBB : 132633526 132636921 132645335
NTA : 107759896 107776199 107780326 107784644 107824015 107829306
NSY : 104214032 104219570 104236463
NTO : 104092250 104104527 104120680
NAU : 109217886 109221000 109225596 109239640
INI : 109147674 109158438 109186622
ITR : 115999746 116012189 116019189
SIND : 105161929 105173683
OEU : 111379972 111384856 111411455
SSPL : 121746682 121750403 121783554 121786269 121793382 121801447
SMIL : 130987662 131021449 131021462
SHIS : 125186881 125192207 125209534
APAN : 127239533 127264161
HAN : 110880261 110893699 110897767 110916508
ECAD : 122588767 122588803 122607398
LSV : 111882147 111892622 111902717
CCAV : 112509462 112511044 112516390
DCR : 108193846 108211059 108219676 108224330
CSIN : 114302496 114302498
RVL : 131311724 131320017 131325324
AEW : 130756745 130761930 130782600 130784420 130796308
CQI : 110682960 110684393 110688077 110733846
ATRI : 130813766 130815046 130827373
MING : 122076653 122083431
TSS : 122640521 122641411 122648264 122653778 122658402 122663617 122667975
PSOM : 113293923 113326900 113327705 113339765
DOSA : Os01g0106800 Os02g0708300
TDC : 119266566 119274241 119317601 119323775
TAES : 123068146 123128144 123137940 123145238 123172046 123172497
LPER : 127306479 127341399
LRD : 124661924 124666909 124688142
ZMA : 100192928 103634739 103649912
MFLO : 136451801 136457938 136464298
SITA : 101761659 101778950
PVIR : 120649760 120656974 120676393 120706260
PHAI : 112879972 112893014
PAUA : 133895162 133908422 133919641 133921413
PDA : 103701991 103711519 120113304
MUS : 103977230 103981809 135614588 135625120
ZOF : 121967126 121981914 121985754 122010237 122017693 122052315
MSIN : 131227046 131251730
ACAK : 137956440 137959059
NCOL : 116259708 116262899
SMO : SELMODRAFT_269625 SELMODRAFT_269937
PPP : 112284365 112288983 112295784
NCS : NCAS_0C04480(NCAS0C04480)
NDI : NDAI_0G03860(NDAI0G03860)
TPF : TPHA_0P01470(TPHA0P01470)
TBL : TBLA_0B08710(TBLA0B08710)
TDL : TDEL_0A00470(TDEL0A00470)
KAF : KAFR_0C01780(KAFR0C01780)
KNG : KNAG_0A01280(KNAG0A01280)
CAL : CAALFM_C302450WA(HRT1)
YLI : 2906622(YALI2_C00737g)
NTE : NEUTE1DRAFT116888(NEUTE1DRAFT_116888)
SMP : 10803180(SMAC4_07095)
FPOA : FPOAC1_002619(RBX1)
TATV : 25780966(TrAtP1_009786)
PLJ : 90642691(PLICBS_002297)
CDET : 87937362(CDEST_00859)
BFU : BCIN_03g07500(Bchrt1)
PTRR : 6339032(PtrM4_013440)
CDEP : 91086181(L203_101969)
KMG : 30164900(I203_108193)
KNE : 92177641(IAR55_000381)
CCAC : CcaHIS019_0203440(HRT1)
ABP : AGABI1DRAFT130185(AGABI1DRAFT_130185)
ABV : AGABI2DRAFT139777(AGABI2DRAFT_139777)
PCUB : JR316_0006035 JR316_0013262
SCM : SCHCO_02628431(SCHCODRAFT_02628431)
PGR : PGTG_10430 PGTG_18192
PTRC : PtA15_6A509 PtA15_8A735
EHI : EHI_151630(2.t00108)
EIV : EIN_381390 EIN_381400
PLAG : 39740038(PADL01_0318000)
PMAL : PMUG01_08037000(RBX1)
PBRS : 92370500(MKS88_002412)
PREL : PRELSG_0819000(RBX1)
PTM : GSPATT00005494001 GSPATT00011131001 GSPATT00021114001 GSPATT00023020001 GSPATT00024170001 GSPATT00030724001
PTI : PHATRDRAFT_39090(Rbx1)
AAF : AURANDRAFT_22764 AURANDRAFT_8889
BLAC : 94347193(CCR75_003427)
TBG : TbgDal_V5200 TbgDal_X2190 TbgDal_X9640
LMA : LMJF_21_0023 LMJF_24_1610
LIF : LINJ_21_0040 LINJ_24_1680
LDO : LDBPK_210040 LDBPK_241680
LMI : LMXM_21_0023 LMXM_24_1610
LMAT : 92514592(LSCM1_04578) 92515105(LSCM1_05120)
LBZ : LBRM_21_0040 LBRM_24_1670
LPAN : LPMP_210030 LPMP_241580
LOI : 92361329(LSCM4_05455) 92361576(LSCM4_05710)
LEIS : 94180333(GH5_04921) 94181034(GH5_05677)
LENR : 94172219(CUR178_05014) 94173322(CUR178_06138)
LEIN : 94188486(JIQ42_04837) 94188846(JIQ42_05208)
PHET : 94291023(JKF63_04976) 94291677(JKF63_05643)
TVA : TVAG_2v0582920 TVAG_2v1003330 TVAG_2v1003460
EHX : EMIHUDRAFT_358602 EMIHUDRAFT_49116 EMIHUDRAFT_50030
» show all
Taxonomy
Reference
Authors
Kim AY, Bommelje CC, Lee BE, Yonekawa Y, Choi L, Morris LG, Huang G, Kaufman A, Ryan RJ, Hao B, Ramanathan Y, Singh B
Title
SCCRO (DCUN1D1) is an essential component of the E3 complex for neddylation.
Journal
Reference
Authors
Kurz T, Chou YC, Willems AR, Meyer-Schaller N, Hecht ML, Tyers M, Peter M, Sicheri F
Title
Dcn1 functions as a scaffold-type E3 ligase for cullin neddylation.
Journal
Reference
Authors
Scott DC, Monda JK, Grace CR, Duda DM, Kriwacki RW, Kurz T, Schulman BA
Title
A dual E3 mechanism for Rub1 ligation to Cdc53.
Journal
Reference
Authors
Scott DC, Sviderskiy VO, Monda JK, Lydeard JR, Cho SE, Harper JW, Schulman BA
Title
Structure of a RING E3 trapped in action reveals ligation mechanism for the ubiquitin-like protein NEDD8.
Journal
Reference
Authors
Monda JK, Scott DC, Miller DJ, Lydeard J, King D, Harper JW, Bennett EJ, Schulman BA
Title
Structural conservation of distinctive N-terminal acetylation-dependent interactions across a family of mammalian NEDD8 ligation enzymes.
Journal
Other DBs
ExplorEnz - The Enzyme Database: 2.3.2.32
ExPASy - ENZYME nomenclature database: 2.3.2.32