Entry
Name
allophanate hydrolase;
allophanate lyase;
AtzF;
TrzF
Class
Hydrolases;
Acting on carbon-nitrogen bonds, other than peptide bonds;
In linear amides
BRITE hierarchy
Sysname
urea-1-carboxylate amidohydrolase
Reaction(IUBMB)
urea-1-carboxylate + H2O = 2 CO2 + 2 NH3 [RN:
R00005 ]
Reaction(KEGG)
Substrate
Product
Comment
Along with EC
3.5.2.15 (cyanuric acid amidohydrolase) and EC
3.5.1.84 (biuret amidohydrolase), this enzyme forms part of the cyanuric-acid metabolism pathway, which degrades s-triazide herbicides, such as atrazine [2-chloro-4-(ethylamino)-6-(isopropylamino)-1,3,5-triazine], in bacteria. The yeast enzyme (but not that from green algae) also catalyses the reaction of EC
6.3.4.6 , urea carboxylase, thus bringing about the hydrolysis of urea to CO2 and NH3 in the presence of ATP and bicarbonate. The enzyme from Pseudomonas sp. strain ADP has a narrow substrate specificity, being unable to use the structurally analogous compounds urea, hydroxyurea or methylcarbamate as substrate [6].
History
EC 3.5.1.54 created 1986, modified 2008
Pathway
ec01110 Biosynthesis of secondary metabolites
ec01120 Microbial metabolism in diverse environments
Orthology
K14541 urea carboxylase / allophanate hydrolase
Genes
NCS : NCAS_0B02280(NCAS0B02280)
NDI : NDAI_0C05400(NDAI0C05400)
TPF : TPHA_0L01560(TPHA0L01560)
TDL : TDEL_0B03290(TDEL0B03290)
KNG : KNAG_0A03800(KNAG0A03800)
LBG : 92207816(LODBEIA_P26200)
CAL : CAALFM_C104660WA(DUR1)
ASAU : 88173788(PUMCH_002724)
YLI : 2912284(YALI2_F00479g) 2912433(YALI2_E00159g)
PLJ : 28884138(PLICBS_005409)
CDET : 87943489(CDEST_06986)
REE : electrica_02560(atzF)
RTG : NCTC13098_03736(gatA_1)
CLAP : NCTC11466_02329(gatA_2)
KOR : AWR26_11270(atzF) AWR26_16850(atzF)
KRD : A3780_07410 A3780_12825
KOU : C0557_07840(atzF) C0557_13855(atzF)
KIE : NCTC12125_02717(gatA_2)
AHN : NCTC12129_02474(gatA_1) NCTC12129_02475(gatA_2)
MPHG : MPHASIOC01_001181(atzF)
SFJ : SAMEA4384070_1467(gatA_2)
SOF : NCTC11214_05515(gatA_2)
SSAR : SSARUM_001345(atzF)
SERA : Ser39006_007510(atzF)
PAQU : DMB82_0010215(atzF)
PARL : PEC302110_21390(atzF)
DIC : Dpoa569_0003048(atzF)
XPH : XppCFBP6546_12170(atzF)
PST : PSPTO_1361 PSPTO_4244
PSYR : N018_05600 N018_19800
PSP : PSPPH_1242 PSPPH_3976
PSAV : PSA3335_06015 PSA3335_09725
PAVL : BKM03_07635(atzF) BKM03_23020(atzF)
PVD : CFBP1590__1310(atzF) CFBP1590__4583(atzF)
PCAB : JGS08_18980(atzF) JGS08_20565(atzF)
PCOF : POR16_05435(atzF) POR16_18395(atzF)
PTRE : I9H09_05600(atzF) I9H09_18710(atzF)
PSYI : MME58_05835(atzF) MME58_20370(atzF)
PAST : N015_04725(atzF) N015_20945(atzF)
PLUL : FOB45_03030(atzF) FOB45_19205(atzF)
PSKU : KUIN1_12200 KUIN1_39550
PMOR : PMm318_A25150(atzF)
MBS : MRBBS_3249 MRBBS_3260
MPQ : ABA45_15395 ABA45_15440
ABER : BSR55_14170 BSR55_16875
HMI : soil367_09325 soil367_14570(atzF) soil367_16805(atzF)
THIO : AYJ59_03325 AYJ59_04295
NAX : HC341_02810(atzF) HC341_03815(atzF)
ALCA : ASALC70_01823(atzF)
APAC : S7S_02700 S7S_12170
CDIZ : CEDIAZO_01575(atzF)
BXB : DR64_6673(atzF) DR64_6690(atzF)
BPY : Bphyt_5227 Bphyt_5244
BFN : OI25_3648(atzF) OI25_7103(atzF)
PSPW : BJG93_20130(atzF) BJG93_33420(atzF)
PARB : CJU94_22270(atzF) CJU94_22355(atzF)
PTRO : G5S35_16565(atzF) G5S35_26065(atzF)
PDIO : PDMSB3_1720.1 PDMSB3_1738.1(atzF)
PLG : NCTC10937_01302(gatA_2)
AXX : ERS451415_05059(gatA_8)
RHOF : AB3G31_13460(atzF) AB3G31_19235(atzF)
HTN : KI616_00255(atzF) KI616_09385 KI616_25525(atzF)
HCZ : G9Q37_09040(atzF) G9Q37_14545(atzF)
RGU : A4W93_06125 A4W93_16145
HSE : Hsero_1413 Hsero_4470(gatA)
HSZ : ACP92_07095 ACP92_22320
HRB : Hrubri_1237 Hrubri_4413
HHF : E2K99_07100(atzF) E2K99_23520(atzF)
HEW : HBDW_13120(atzF) HBDW_46120(atzF)
MEU : ACJ67_01995 ACJ67_03685
MEDZ : MTDW_21680(atzF) MTDW_24680(atzF)
URU : DSM104443_03825(atzF)
THAG : CKCBHOJB_00354(kipA)
ACOM : CEW83_09345(atzF) CEW83_17195(atzF)
RBS : RHODOSMS8_03365(atzF)
SFD : USDA257_c27410(gatA1)
ALF : CFBP5473_16415(atzF)
ALEG : CFBP4996_01290 CFBP4996_01350(atzF)
RTR : RTCIAT899_PC07775 RTCIAT899_PC08545
RHR : CKA34_26525(atzF) CKA34_31170(atzF)
RLS : HB780_09680(atzF) HB780_11915(atzF)
RSUL : N2599_29100(atzF) N2599_32365
RLW : RlegWSM1455_10020 RlegWSM1455_32805(atzF)
RRHO : PR018_18380 PR018_24730(atzF)
RTU : PR017_25555(atzF) PR017_27080
ARA : Arad_10039(atzF) Arad_9881(atzF)
RBW : RLCC275e_10145 RLCC275e_30755(atzF)
RIF : U5G49_002009 U5G49_006879(atzF)
RHIB : I8E17_24025(atzF) I8E17_29080(atzF)
RHIA : ACO34A_06950 ACO34A_25340
RHIW : KQ933_22660(atzF) KQ933_26305(atzF)
BJA : bll1044(bll1044) bll5806(bll5806)
BJU : BJ6T_10690 BJ6T_39000
BJP : RN69_05215 RN69_18925
BRAD : BF49_5027 BF49_5834
BIC : LMTR13_27670 LMTR13_36490
BRQ : CIT40_24985 CIT40_30225(atzF)
BGZ : XH91_12440(atzF) XH91_33180(atzF)
BSYM : CIT39_23950 CIT39_29330(atzF)
BVZ : BRAD3257_0587 BRAD3257_8682(atzF)
BSEP : HAP48_0012065(atzF)
BBAN : J4G43_034840(atzF) J4G43_050860(atzF)
BCAN : BcanWSM471_25765(atzF) BcanWSM471_29180 BcanWSM471_35600(atzF)
BCOU : IC761_12620(atzF) IC761_34795(atzF)
BROS : QUH67_25005(atzF) QUH67_33765(atzF)
BRAZ : LRP30_02200(atzF) LRP30_43425(atzF)
BOY : LQG66_25770(atzF) LQG66_26960(atzF)
BRAY : ML401_27055 ML401_32820(atzF)
BLUP : AB3L03_15675(atzF) AB3L03_26130 AB3L03_30890(atzF)
RPA : TX73_007205(atzF) TX73_007530(atzF)
RHOR : ONR75_02940(atzF) ONR75_03535
VGO : GJW-30_1_01656(atzF)
TRB : HB776_09310(atzF) HB776_26120(atzF)
TARD : RSO67_10465(atzF) RSO67_19660(atzF)
XDI : EZH22_13230 EZH22_24815(atzF)
AQI : J5J86_05075(atzF) J5J86_15915(atzF)
METQ : MSPGM_09700 MSPGM_37080
MRD : Mrad2831_4565 Mrad2831_6163
MAQU : Maq22A_1p30070(gatA)
MMES : MMSR116_15635(atzF)
MTUN : MTUNDRAET4_3061(atzF)
BBAI : CU048_05650(atzF) CU048_06605
DNP : N8A98_16455(atzF) N8A98_20545 N8A98_21305(atzF)
PLEO : OHA_1_04343(atzF) OHA_2_00069(atzF)
RLI : RLO149_c040170(atzF)
TPRO : Ga0080559_TMP452 Ga0080559_TMP462
SULY : ABM428_02540 ABM428_14780(atzF)
AHT : ANTHELSMS3_01746 ANTHELSMS3_01748
SSTL : ABFK29_04715(atzF) ABFK29_07625
LALG : LentiSH36_02104 LentiSH36_02644
MATG : ACMVPR_01850 ACMVPR_14665
LVS : LOKVESSMR4R_03018(atzF)
AZL : AZL_a09070(gatA) AZL_b03880(gatA)
AZS : E6C72_15840(atzF) E6C72_24400(atzF)
NCB : C0V82_20995(atzF) C0V82_24165(atzF)
SKT : IGS68_23155(atzF) IGS68_28350(atzF)
SMUC : JL100_022500(atzF) JL100_024780(atzF)
SROE : JL101_001070(atzF) JL101_001870(atzF)
PJD : Pjdr2_2806 Pjdr2_4924
PAEA : R70723_08810 R70723_12245
MSA : Mycsm_03320 Mycsm_04304
MADI : A7U43_15395 A7U43_22445
MYW : BVC93_20550 BVC93_26605
MYJ : BCA37_16095 BCA37_22260
MNE : D174_09320 D174_15555
MYN : MyAD_09135 MyAD_15280
MTHN : 4412656_02192(gatA_2)
MDR : MDOR_12390(atzF) MDOR_20430
MAUU : NCTC10437_02946(gatA_2) NCTC10437_03799
MMAG : MMAD_20240 MMAD_29840
MTY : MTOK_48290 MTOK_60730
MPSC : MPSYJ_27500 MPSYJ_35780
MARZ : MARA_09240 MARA_20160
MPOF : MPOR_34100 MPOR_42040
MPHU : MPHO_02720(atzF) MPHO_34670
MMUC : C1S78_000815 C1S78_017060(atzF)
MSEI : MSEDJ_32450 MSEDJ_42530
MAUS : JN090_14540 JN090_19725(atzF)
MFRE : EXE63_06095(atzF) EXE63_28550
MYQ : TUM20985_38170(atzF)
MFLU : HZU40_21165 HZU40_26305(atzF)
MSAL : DSM43276_01421(atzF)
NFR : ERS450000_01879(gatA_2)
NSR : NS506_01455 NS506_03810
NAD : NCTC11293_01072(gatA_1)
NYA : LTV02_09925 LTV02_23590(atzF)
NSPU : IFM12276_67400(atzF)
NYU : D7D52_03330(atzF) D7D52_26005
RPY : Y013_09820 Y013_13940
RRT : 4535765_03781(gatA_7)
RCR : NCTC10994_03485(gatA_3)
WHR : OG579_09415(atzF) OG579_12620
GOR : KTR9_3137 KTR9_3822 KTR9_4376
GOM : D7316_00134(atzF_1) D7316_04837(atzF_2)
GAV : C5O27_08520(atzF) C5O27_11840
GOD : GKZ92_15080 GKZ92_18535(atzF)
GJI : H1R19_15225 H1R19_18450(atzF)
GAMI : IHQ52_19020 IHQ52_22535(atzF)
GMG : NWF22_00710 NWF22_03950(atzF)
TPUL : TPB0596_30080(atzF)
SCI : B446_01060 B446_34235
SPAD : DVK44_04075(atzF) DVK44_33650(atzF)
YIA : LO772_02755(atzF) LO772_07685(atzF)
CART : PA27867_0256 PA27867_2518
AAGI : NCTC2676_1_01187(gatA_3)
ARTM : MN0502_01600 MN0502_01610
PSNI : NIBR502771_03895(atzF)
RAIN : Rai3103_05040(atzF)
AJA : AJAP_25725 AJAP_27500
AMYB : BKN51_03945 BKN51_05730
AORI : SD37_12365 SD37_14200
AROO : NQK81_09230(atzF) NQK81_11005
ARHD : VSH64_02510(atzF) VSH64_20285
ACYN : ORV05_11655(atzF) ORV05_22085
ACOR : LCL61_32220(atzF) LCL61_36460
ACAB : QRX50_25385(atzF) QRX50_43800
AMYD : K1T34_00045(atzF) K1T34_31360
AMYE : MJQ72_03675(atzF) MJQ72_05530
AMYS : CVV72_16000 CVV72_17825
MENO : Jiend_55120 Jiend_55870
PARQ : DSM112329_01922(atzF_2)
GCY : LQF76_14440(atzF) LQF76_14460
» show all
Taxonomy
Reference
1
Authors
Maitz GS, Haas EM, Castric PA.
Title
Purification and properties of the allophanate hydrolase from Chlamydomonas reinhardii.
Journal
Biochim Biophys Acta 714:486-491 (1982)
Reference
Authors
Roon RJ, Levenberg B.
Title
Urea amidolyase. I. Properties of the enzyme from Candida utilis.
Journal
J Biol Chem 247:4107-13 (1972)
Reference
Authors
Sumrada RA, Cooper TG.
Title
Urea carboxylase and allophanate hydrolase are components of a multifunctional protein in yeast.
Journal
J Biol Chem 257:9119-27 (1982)
Reference
Authors
Kanamori T, Kanou N, Kusakabe S, Atomi H, Imanaka T
Title
Allophanate hydrolase of Oleomonas sagaranensis involved in an ATP-dependent degradation pathway specific to urea.
Journal
Reference
Authors
Cheng G, Shapir N, Sadowsky MJ, Wackett LP.
Title
Allophanate hydrolase, not urease, functions in bacterial cyanuric acid metabolism.
Journal
Reference
Authors
Shapir N, Sadowsky MJ, Wackett LP
Title
Purification and characterization of allophanate hydrolase (AtzF) from Pseudomonas sp. strain ADP.
Journal
Sequence
Reference
Authors
Shapir N, Cheng G, Sadowsky MJ, Wackett LP
Title
Purification and characterization of TrzF: biuret hydrolysis by allophanate hydrolase supports growth.
Journal
Other DBs
ExplorEnz - The Enzyme Database: 3.5.1.54
ExPASy - ENZYME nomenclature database: 3.5.1.54
UM-BBD (Biocatalysis/Biodegradation Database): 3.5.1.54