Entry
Name
S-methyl-5-thioribulose 1-phosphate isomerase;
rlp (gene name);
5-methylthioribulose-1-phosphate isomerase (incorrect)
Class
Isomerases;
Intramolecular oxidoreductases;
Transposing C=C bonds
BRITE hierarchy
Sysname
S-methyl-5-thio-D-ribulose 1-phosphate 1,3-isomerase
Reaction(IUBMB)
(1) S-methyl-5-thio-D-ribulose 1-phosphate = S-methyl-1-thio-D-xylulose 5-phosphate [RN:
R12718 ];
(2) S-methyl-5-thio-D-ribulose 1-phosphate = S-methyl-1-thio-D-ribulose 5-phosphate [RN:
R12719 ]
Reaction(KEGG)
Substrate
S-methyl-5-thio-D-ribulose 1-phosphate [CPD:
C04582 ]
Product
S-methyl-1-thio-D-xylulose 5-phosphate [CPD:
C22359 ];
S-methyl-1-thio-D-ribulose 5-phosphate [CPD:
C22360 ]
Comment
The enzyme, characterized from the bacterium Rhodospirillum rubrum, participates in methionine salvage from S-methyl-5'-thioadenosine. It is a RuBisCO-like protein (RLP) that is not capable of carbon fixation, and catalyses an isomerization reaction that converts S-methyl-5-thio-D-ribulose 1-phosphate to a 3:1 mixture of S-methyl-1-thioxylulose 5-phosphate and S-methyl-1-thioribulose 5-phosphate. The reaction is an overall 1,3-proton transfer, which likely consists of two 1,2-proton transfer events.
History
EC 5.3.3.23 created 2021
Pathway
ec00270 Cysteine and methionine metabolism
Orthology
K25035 S-methyl-5-thioribulose 1-phosphate isomerase
Genes
URU : DSM104443_00902(rlp)
UPL : DSM104440_00833(rlp)
MTUN : MTUNDRAET4_0551(rlp)
VRM : 44547418_01345(mtnW)
VDN : NCTC11831_00612(mtnW)
» show all
Taxonomy
Reference
Authors
Imker HJ, Singh J, Warlick BP, Tabita FR, Gerlt JA.
Title
Mechanistic diversity in the RuBisCO superfamily: a novel isomerization reaction catalyzed by the RuBisCO-like protein from Rhodospirillum rubrum.
Journal
Reference
Authors
Erb TJ, Evans BS, Cho K, Warlick BP, Sriram J, Wood BM, Imker HJ, Sweedler JV, Tabita FR, Gerlt JA.
Title
A RubisCO-like protein links SAM metabolism with isoprenoid biosynthesis.
Journal
Sequence
Other DBs
ExplorEnz - The Enzyme Database: 5.3.3.23
ExPASy - ENZYME nomenclature database: 5.3.3.23