KEGG   Pectobacterium atrosepticum SCRI1043: ECA0106
Entry
ECA0106           CDS       T00186                                 
Symbol
expR
Name
(GenBank) quorum-sensing transcriptional regulator
  KO
K19734  LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
Organism
eca  Pectobacterium atrosepticum SCRI1043
Pathway
eca02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:eca00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ECA0106 (expR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:eca03000]
    ECA0106 (expR)
Transcription factors [BR:eca03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    ECA0106 (expR)
SSDB
Motif
Pfam: Autoind_bind GerE Sigma70_r4_2 HTH_10 Sigma70_r4
Other DBs
NCBI-ProteinID: CAG73026
UniProt: Q6DAZ6
Position
complement(126323..127051)
AA seq 242 aa
MSPLFTNSEIISRVIKEHFNKNLDHYDGVKFSFMVLNKKNPSQMIIISSYPDEWVNLYKE
NKYQHIDPVVLASFNKISPFSWEKSLVINTRLQLAKIFDLSKKYDIINGYTFVLHDHGDN
LAMLSIIVDNSYPDDVETFIEERKDIFQMLLIEAYEKIISLCKEMIGNKKQLNNKEIFSQ
RENEILYWASMGKTYLEVAIILGIKTSTVKFHIGNVVKKLGVLNAKHAIRLGVELQLIKP
VQ
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtcgccattattcaccaacagtgaaataataagcagggtaatcaaagagcacttcaat
aaaaacctggatcactacgacggcgtaaaattctcatttatggttctcaataagaagaac
ccttctcaaatgatcatcatttccagctatcctgatgaatgggtgaatctctataaagaa
aataagtatcaacatattgatcctgttgttcttgcttcatttaataagatatcacctttc
tcttgggagaaaagtctagttattaatactcgactacagcttgccaagatattcgacctc
tctaaaaaatatgacattatcaacgggtatacttttgtgcttcacgatcatggcgacaac
ctggccatgttatctattatcgtggataactcgtatccagatgacgttgaaacattcatt
gaagagagaaaagacatctttcaaatgctattaatcgaggcatatgaaaaaatcatctcc
ctttgcaaggagatgattggaaataagaaacaattaaataataaagaaatattctctcaa
cgagaaaatgaaattctttactgggccagcatgggtaaaacctatctggaagtggctatt
attctcggtataaaaaccagcacggtaaaatttcatatcggcaacgttgtgaaaaaactt
ggcgtcctgaatgccaagcatgccataaggctcggcgttgagttacagctcatcaagcct
gtgcaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system