KEGG   Pectobacterium atrosepticum SCRI1043: ECA0288
Entry
ECA0288           CDS       T00186                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
eca  Pectobacterium atrosepticum SCRI1043
Pathway
eca02020  Two-component system
eca02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:eca00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ECA0288 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ECA0288 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eca03021]
    ECA0288 (rpoN)
Transcription machinery [BR:eca03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ECA0288 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: CAG73208
UniProt: Q6DAG5
Position
complement(336007..337440)
AA seq 477 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDQHDEIESFE
KADSDSLDTGEALEQRDMPEELPLDATWDEIYSAGTPSGTGSDYRDEELPIYQGETTQTL
QDYLMWQVELTPFSDTDAAIATSIVDAVDNTGYLTVPLGDILDSIGDDDVTLEEVEAVLK
RVQRFDPVGVAARDLRDCLLVQLSQFDDSTPRLAEARLIVSDHLDLLANHDFRSLIRVTR
LKEEVLKEALALIQSLDPRPGQSINTGESEYVIPDVLVRKVQGIWAVELNTDSVPRLQIN
QQYAALGNSVRNDSDGQFIRSNLQEARWLIKSLESRNDTLLKVTRCIVEQQKDFFDQGEE
FMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLIAAENPVKPLSDSKLTALLSDQGIIVARRTVAKYRESLSIPPSNQRKQLI
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactcaggcttagccagcaactggccatgaccccacagctccaa
caggccatccgcctgttgcaactgtccacgcttgaattgcaacaggagattcaactggcg
ctagaaagcaatccgttgctcgaacaaacggatcagcacgacgaaatcgagtcatttgaa
aaggcagatagcgattcactggataccggtgaagcccttgagcaaagggacatgccggaa
gaattgccgctcgatgccacctgggatgagatctactccgcaggcacgccgtcgggcact
ggctctgactatcgcgatgaagaactccctatttatcaaggcgaaaccacgcaaacgctt
caggattacctgatgtggcaggttgagctgacgccattttcagacaccgacgcggccatt
gcgacttctatcgtcgatgcggtagacaatacaggctacctgaccgtgccgctgggggac
atcctcgacagcatcggtgacgacgacgtgacgctggaagaagtcgaagccgtacttaaa
cgcgtgcaacgcttcgatcccgttggcgtcgccgcccgcgatctgcgtgattgtctgctg
gtacagctttcccaatttgacgacagcacaccgcgtctggccgaagctcgcctgatcgtc
agcgatcatctcgatctattagccaaccatgatttccgcagcctgatccgcgttacccgt
ctgaaagaagaggtgctgaaagaagcgctagcgctgatccaatcgctcgatccacgtcct
gggcagtcgatcaacaccggtgaatccgaatacgtgattcctgacgtgctggtgcgcaaa
gttcagggaatctgggccgttgaactgaataccgatagcgttccccgattgcagattaac
cagcaatatgctgctctgggcaacagcgtacgtaacgacagcgacgggcaatttatccgc
agcaacctgcaagaagcgcgctggctcatcaagagcctagaaagccgcaatgacacgttg
ctgaaagtgacccgctgtatcgtcgagcaacagaaggatttcttcgatcagggtgaagaa
ttcatgaagcccatggtactggcagacatcgcgcaggcggtggatatgcatgaatccact
atttcacgcgtgacgacacagaagttcctgcacagtccgcgcggcatttttgagctaaaa
tatttcttctccagccacgtaaataccgatagcggtggagaagcctcgtcaacggcaatt
cgcgcgttggtgaagaagcttattgcagcggaaaaccccgtgaagccactaagcgatagc
aagcttacggcactgctctccgatcagggcatcatcgtggcgcgccgtaccgttgcaaaa
taccgagagtctttatctatcccaccatcaaatcagcgtaaacaactgatttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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