KEGG   Pectobacterium atrosepticum SCRI1043: ECA0560
Entry
ECA0560           CDS       T00186                                 
Name
(GenBank) putative plasmid transfer protein
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
eca  Pectobacterium atrosepticum SCRI1043
Brite
KEGG Orthology (KO) [BR:eca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:eca02044]
    ECA0560
Secretion system [BR:eca02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   ECA0560
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87
Other DBs
NCBI-ProteinID: CAG73475
UniProt: Q6D9Q5
Position
626208..628304
AA seq 698 aa
MSDRYVIEALLRPAVELNTAVVSATAAFVCVQAPWAIALAPSVSYVTAGGFAVLAMVRTR
QGMKVLRYRRNLRRLPRYVMSSKQIPVSKRRLFIGKGFMWTQKHTQRLRDTLRPEVERYI
QPPTLYQAARKLENAAEHNLPWLTKLLSVDSPLNPVRPLPPVGGKPVLHGIEPDEVDVTM
PLADRPGHTIVLGTTRVGKTRLAELFITQDIRRGDVTIVFDPKGDPDLLRRVWAEAHRAG
RGDSLYIFHLGWPEISARYNAVGRFGRVSEVASRISGQLAGEGNSAAFKEFAWRFVNIVA
RALVALGERPDYTLIMRYVNNIADLYLRYAEKIIEEELPELQLQIRNNLGVFTDEDVPRN
MQGQPNSVGIWAIEVALSSEAGKKLYDPILDGLRSAVRYDRTYFDKIVASLLPLLEKLTT
GKTASLLSPDYLDMDDSRPIFDWEQIVRKRGVVYIGLDALTDSEVATAVGNSMFADLVSV
AGHIYKHGINAGLPQQKEEKAVINLHCDEFNELMGDEFIPLINKGGGAGVQVTAYTQTSS
DIEARIGNAAKTAQVIGNFNTLIMLRVRDNKTAELLTTQLPQVEIYSKTLVSGHSDTANV
ETGQDFTSSTQDRVGTIKTPLIEPSDVVSLPKGQAFALLEGGQLWKIRMPLPTNDIDDAM
MPANLQAVATEMRRNYHSSEGWWSGRSLTAADRQVGGE
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgagcgatcgttatgtcattgaggcattgctgcggcccgctgttgaactgaacactgcc
gtagtttcggctacagcagcatttgtctgtgtgcaggcaccatgggcgattgcgttggcc
ccttcagtcagttatgtgacggccggtgggttcgctgttctggccatggtacgaacccgc
cagggaatgaaggtactgcgttaccgtcgtaatttacgacgcctaccacgttacgtgatg
agtagtaagcagatccctgtaagtaaacggcggttgtttatcggtaagggatttatgtgg
acgcagaaacacacccaacggctgcgtgacacgttacgtccggaggtcgagcgttatatt
cagccgccaaccctgtatcaggccgcccgtaaactagagaatgcagcagagcataacttg
ccctggctcacgaaactactgagcgtagattctcctctgaacccagtgcgcccattaccg
cccgtcggtggaaagccggtactacatggtattgagcctgatgaggttgatgtcactatg
ccactggccgatcgccccggtcataccatcgtattgggtacgactcgtgttggaaaaaca
cggttggccgaactgtttattacccaggatatccgccgtggtgatgtgacgattgtcttc
gatccaaagggtgaccctgatttattacgtcgagtctgggctgaagcgcaccgtgccggg
cgaggtgattcgctctacatcttccatctgggttggcccgaaatatcagctcgttataac
gccgttggacggtttgggcgtgtctctgaagtggcgtcgcgtatctctgggcaattggcg
ggggaagggaacagtgctgcatttaaagagtttgcgtggcgtttcgtaaatattgtagcc
agagcactggttgcattgggtgagcggcctgactacacgctaattatgcgttacgtcaat
aatattgcggacctgtatctacgctatgctgagaaaatcattgaagaggaactacccgag
ctacaactgcagatacgcaataacttaggggtattcactgatgaagatgttccccgaaat
atgcagggccagcctaatagcgttggcatttgggcaatagaggttgcgttaagctcagag
gccggtaagaaactctatgatccgattttggatggcttgcgctctgcggttcgctatgac
agaacttatttcgacaaaattgttgcctctttattaccattattggagaaactgacgacg
ggtaaaacggcgtccctgttgtcgccggactatctggatatggatgactcacgccccatt
tttgattgggaacaaattgttcgcaaacgaggtgttgtgtatatcggtctggacgccctt
acagacagtgaagttgctacggcagtggggaacagcatgtttgccgatctggttagcgtg
gctggccatatttataaacatggtattaatgctggactgccacagcagaaagaagaaaaa
gccgtcattaacctgcattgcgatgagttcaatgagctaatgggtgatgaattcattccg
ttgatcaacaaaggcggtggtgctggcgttcaagtgaccgcctatacgcaaacttcatca
gatatcgaggcgcgtatcgggaatgctgcgaaaacggctcaggtcattggtaacttcaat
acactgatcatgctgcgtgtccgggacaacaaaactgcagaattgctcacgacacagctg
ccgcaggttgagatctacagtaaaacgttggtttctggtcactcggatacggctaatgtt
gagactggacaggattttacatccagtactcaggatcgtgttggtacgataaaaaccccg
ttgattgagccgtctgatgtcgtcagcctgcctaaaggccaggcgttcgccctgcttgaa
ggtggtcagttgtggaaaatcaggatgccgctgccgaccaatgatattgatgatgcgatg
atgccagcaaacttgcaggctgtggcgacagaaatgcgccgtaactatcattccagtgag
ggatggtggagcgggcgttcacttactgctgcagatcggcaagtgggaggtgagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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