KEGG   Equus caballus (horse): 100034052
Entry
100034052         CDS       T01058                                 

Gene name
RBM8A
Definition
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
ecb  Equus caballus (horse)
Pathway
ecb03013  RNA transport
ecb03015  mRNA surveillance pathway
ecb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100034052 (RBM8A)
  09122 Translation
   03013 RNA transport
    100034052 (RBM8A)
   03015 mRNA surveillance pathway
    100034052 (RBM8A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecb03019]
    100034052 (RBM8A)
   03041 Spliceosome [BR:ecb03041]
    100034052 (RBM8A)
Messenger RNA biogenesis [BR:ecb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100034052 (RBM8A)
Spliceosome [BR:ecb03041]
 Complex C
  Other components
   EJC/TREX
    100034052 (RBM8A)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 100034052
NCBI-ProteinID: NP_001157445
Ensembl: ENSECAG00000022024
VGNC: 22252
UniProt: F6XEW8
Position
5
AA seq 174 aa
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARMREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVE
YETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcggacgtgctggatcttcatgaggctgggggcgaggatttcgccatggatgaggat
ggggacgagagcatccacaaactaaaagaaaaagcgaagaaacggaagggccgtggcttt
ggctcggaagaggggtcacgagcgcggatgcgtgaggattatgacagtgtggagcaagat
ggtgatgaacccggaccacaacgctctgttgaaggctggattctctttgtcactggagtc
catgaggaagccaccgaagaagacatccatgacaaatttgcagagtatggggaaataaaa
aacatccacctcaacttggacaggcgtacaggatacctgaaggggtatactctagttgag
tatgaaacgtataaagaggctcaggctgctatggaaggactcaatggccaggatttgatg
ggacagccaatcagcgtggactggtgttttgttcggggtccacccaagggcaagaggaga
ggtggccgaagacgcagcaggagtccagaccggaggcgtcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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