KEGG   Equus caballus (horse): 100059851
Entry
100059851         CDS       T01058                                 
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
  KO
K11650  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ecb  Equus caballus (horse)
Pathway
ecb03082  ATP-dependent chromatin remodeling
ecb04714  Thermogenesis
ecb05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100059851 (SMARCD1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    100059851 (SMARCD1)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    100059851 (SMARCD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecb03021]
    100059851 (SMARCD1)
   03036 Chromosome and associated proteins [BR:ecb03036]
    100059851 (SMARCD1)
Transcription machinery [BR:ecb03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     100059851 (SMARCD1)
Chromosome and associated proteins [BR:ecb03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    100059851 (SMARCD1)
   PBAF complex
    100059851 (SMARCD1)
   GBAF(ncBAF) complex
    100059851 (SMARCD1)
SSDB
Motif
Pfam: SWIB DivIC
Other DBs
NCBI-GeneID: 100059851
NCBI-ProteinID: XP_023499295
Ensembl: ENSECAG00000021885
VGNC: 23325
Position
6:68593055..68608200
AA seq 552 aa
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVWSKLSVHLLPSSTEPQDLRPQSSTEVTAAAGPASLPLSGFC
KLATNLREPLVW
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggcggcccgggcaggtttccagtctgtggctccaagcggcggtgccggagcctctgga
ggggccggcgcggcggcggctctgggcccgggcgggactccggggcctcctgtgcgaatg
ggcccggcgccgggtcaagggctgtaccgctccccgatgcccggagcggcctatccgaga
ccaggtatgctgccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggaccagtcccgc
aagagacctgcacctcagcagatccagcaggtccagcagcaggcggtccaaaatcgaaat
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcttatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaggaggctttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggatggg
gaagggacggtggcttcctgggagcttcgggtagaaggacggctcctggaggattcagcc
ttgtccaaatatgatgccaccaaacaaaagaggaagttctcttccttttttaagtccttg
gtgatcgaactggacaaagacctgtatgggccagacaaccatctggtagaatggcacagg
accgccactacccaggagacggatggcttccaggtgaagcggccaggagacgtgaatgta
cggtgtactgtcctgctgatgctggattaccagcccccccagtttaaattagaccctcgc
ctggctcggctcctgggcatccacacccagacccgtccagtgatcatccaagcactgtgg
caatacattaagacgcataagctccaggaccctcatgagcgggagtttgtcatctgtgac
aagtacctccagcagatctttgagtctcagcgtatgaagttttcagagatccctcaacgc
ctccacgccttgcttatgccaccagagcccatcatcattaaccatgtcatcagtgttgac
ccgaatgatcagaaaaagacggcttgttatgacattgatgtggaagtggatgataccttg
aagacccagatgaattctttcctcttgtctactgccagccagcaggagattgctactcta
gacaacaagatccatgagacaatagaaactatcaatcaactgaagacccagcgggaattc
atgctgagctttgccagagaccctcagggtttcatcaacgactggcttcagtcccagtgc
cgggacctcaagaccatgaccgacgtggtgggtaacccagaggaagagcgccgagctgaa
ttctacttccagccttgggctcaggaggccgtgtgccgatacttctactccaaggtttgg
agcaaactctccgttcacttgttgccctctagcactgagccccaggatctgagaccacaa
agctccacagaggtcacagctgctgcaggtcctgcatcccttcctctttctggcttctgc
aaactcgccactaacctgagggagcccctagtgtggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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