KEGG   Equus caballus (horse): 100060830
Entry
100060830         CDS       T01058                                 
Symbol
MAP1LC3C
Name
(RefSeq) LOW QUALITY PROTEIN: microtubule-associated proteins 1A/1B light chain 3C
  KO
K10435  microtubule-associated protein 1 light chain
Organism
ecb  Equus caballus (horse)
Pathway
ecb04137  Mitophagy - animal
ecb04140  Autophagy - animal
ecb04216  Ferroptosis
ecb04371  Apelin signaling pathway
ecb04621  NOD-like receptor signaling pathway
ecb05014  Amyotrophic lateral sclerosis
ecb05022  Pathways of neurodegeneration - multiple diseases
ecb05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    100060830 (MAP1LC3C)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100060830 (MAP1LC3C)
   04137 Mitophagy - animal
    100060830 (MAP1LC3C)
  09143 Cell growth and death
   04216 Ferroptosis
    100060830 (MAP1LC3C)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    100060830 (MAP1LC3C)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    100060830 (MAP1LC3C)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100060830 (MAP1LC3C)
   05022 Pathways of neurodegeneration - multiple diseases
    100060830 (MAP1LC3C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecb04131]
    100060830 (MAP1LC3C)
   03029 Mitochondrial biogenesis [BR:ecb03029]
    100060830 (MAP1LC3C)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ecb04812]
    100060830 (MAP1LC3C)
Membrane trafficking [BR:ecb04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    100060830 (MAP1LC3C)
Mitochondrial biogenesis [BR:ecb03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Other mitophagy factors
    100060830 (MAP1LC3C)
Cytoskeleton proteins [BR:ecb04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule-associated proteins (MAPs)
     100060830 (MAP1LC3C)
SSDB
Motif
Pfam: ATG8 Chromate_transp
Other DBs
NCBI-GeneID: 100060830
NCBI-ProteinID: XP_023488234
Position
30:3028406..3032684
AA seq 231 aa
MQTPQKSPSISLFEQRKSSATRQEEVAGIRAKFPNKIPVRFHSLTMEQFLPVLDKTXFLP
GPQGLTVTQCLGIIRSPMVLGATEAFHLLVNNRSVASPSVTMAEIYRDCKDKDGFVCMTC
SSQEVFGGLGSAAPSWGQTLPSSPFGDSAWKNGKAESDLNSQDLESSGDFFVLLSDPWAG
MTQGWAQLGVWAGVVPGDLSQHGCQEGASSEGAAGERVIQETEAKLADHRG
NT seq 696 nt   +upstreamnt  +downstreamnt
atgcagactcctcagaaaagcccgagcatcagcctttttgagcagaggaagagctcagca
accagacaagaggaagttgctggaatccgggcaaagttcccaaacaagatcccggtaaga
tttcattcgctcaccatggagcagttcctgcctgtgctggacaagacctagttcctgccc
ggcccacaggggctgaccgtgacccagtgcctcggcatcatccggagccccatggtcctc
ggggccactgaagcctttcacctgctggtgaacaacaggagtgtggccagcccgagtgtg
accatggcagagatctacagggactgcaaggataaggacggcttcgtgtgcatgacctgc
tcctcccaggaggtgtttgggggcttggggtcggcagccccctcctgggggcagaccctg
ccatcctctccatttggggactcagcctggaagaacggaaaggctgagagtgacttgaac
agccaggacctggaatcatctggagacttcttcgttctcttgtctgacccctgggctggg
atgactcaaggctgggcccagctgggagtgtgggctggagtggttccaggtgacctgtct
cagcacgggtgccaggagggagcatcctcagaaggagcagctggagagcgtgtgatccaa
gaaaccgaggcgaagctggccgaccataggggatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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