KEGG   Equus caballus (horse): 100062380
Entry
100062380         CDS       T01058                                 
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
  KO
K10858  DNA mismatch repair protein PMS2
Organism
ecb  Equus caballus (horse)
Pathway
ecb03430  Mismatch repair
ecb03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    100062380 (PMS2)
   03460 Fanconi anemia pathway
    100062380 (PMS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecb03400]
    100062380 (PMS2)
DNA repair and recombination proteins [BR:ecb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     100062380 (PMS2)
SSDB
Motif
Pfam: MutL_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 100062380
NCBI-ProteinID: XP_001494013
Ensembl: ENSECAG00000014072
VGNC: 51217
Position
13:5347312..5371356
AA seq 868 aa
MEGAEGPSTELAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLRLKD
YGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDV
TISTCHASAKVGTRLVFDHNGRIVQKTLYPRPRGTTVSVQQLFYTLPVRHKEFQRNIKKE
YAKMIQVLHAYCIISAGVRVSCTNQVGQGKRQPVVCTSGSTSIKENIGSVFGQKQLQSLI
PFVQLPPSDSVCEEYGLSCSDALHNLFCISGFISRCTHGVGRSSTDRQFFFINRRPCDPA
KVSRLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLI
GMFDSEVNKLNVNQQPLLDTEGNLIKIHSAEVEQPLPEKQDRPASSRTRGEEKRAVTICR
LREAFSLHHATGSKSQGQKAAEPRRISPRQKRSAQFRSTSDSLCPQKPVSATGSSSPREE
ATSSEEDACDRTDKVEKDSGHSSTSAGSGEASSTPETGRHSSSDRTASSPEDRFSQENVE
SCQKLPETGHRFSDTERHLGHEDSGSKFRVLPQPTNLTASNTKRLKKEEIPLNSDILPEL
VNTQSPSVSQVDVAVTINKKIVPLDFSMSSLAKQIKRLHHQEQKRAGEQNYRRFRAKICP
GENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLDADIFIVDQHATDEKYNFEMLQQ
HTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEGAPVTERAKLISLPTSK
NWTFGPQDVDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNASEMRKLITHM
GEMDHPWNCPHGRPTMRHIANLDVISPN
NT seq 2607 nt   +upstreamnt  +downstreamnt
atggagggggccgaggggccgagtacagaacttgccaaggccatcaaacctattgatcgg
aagtcagtccatcagatttgttccggccaggtggtactgagtctcagcaccgctgtgaag
gagttggtcgaaaacagtgtggatgccggtgccactaatattgatctaaggcttaaagac
tatggggtggacctcattgaagtttcagacaatggatgcggggtagaagaagaaaacttt
gaaggtttaactctgaaacatcatacttctaagattcaagagttcgctgacctaacccag
gtggaaactttcggcttccggggggaagctctgagttcactttgtgccctgagcgatgtc
actatttctacctgccacgcgtctgcaaaggtgggaactcgactggtgtttgatcacaat
gggagaattgtccagaaaaccctctacccacggcccagagggacgacggtcagtgtccag
cagttgttttatacgcttcctgtgcgccataaggagtttcagaggaatattaaaaaggag
tatgccaaaatgatccaggtcttacatgcctactgtatcatttcagcaggcgtccgtgta
agttgcaccaatcaggttggacaaggaaagcgacagcctgtggtgtgcacaagtggaagc
accagcatcaaggaaaatattggatcagtgtttgggcagaagcagttgcaaagcctcatt
ccttttgtgcagctgccccctagtgactccgtctgtgaagagtacgggctgagctgttct
gatgctctgcataatctgttttgcatctcaggtttcatttctcgctgtactcatggtgtt
ggaaggagttcaacagacagacaatttttctttatcaatcgacggccttgtgacccagca
aaggtttccagactcgtgaatgaggtctatcacatgtataatcgacatcagtatccattt
gttgttcttaacgtttctgttgattcagaatgtgttgatatcaatgttactccagataaa
aggcaaattctactccaagaggagaagcttttgttggcagttttaaagacgtctttgata
ggaatgtttgatagtgaggtcaacaaacttaatgtcaatcagcagccgctgctggatact
gaagggaacctaataaaaatacactcagcagaggtggaacagcctttgccagaaaagcag
gatcgtcccgcatcgtccaggactcgaggggaggagaagcgggcggtgaccatttgcaga
ctgagagaggccttttcccttcatcacgcgacagggagcaagtctcagggccagaaggct
gctgagcccagacggatttctccaagacagaaaagaagcgcacagtttcgtagcacttcc
gactccctctgcccccagaagcccgtctctgccacaggctcgtccagcccccgggaagag
gcgacgagctcagaggaggatgcctgtgaccgcacggacaaagtggagaaggactcaggg
cacagcagcacttcagccggctcaggggaagcgtccagcaccccagaaacgggccgccac
tccagcagtgaccgcacagcaagctcccctgaagacaggttttcacaagaaaatgtggag
tcttgtcagaagttacctgaaactggccatcgtttttcagacacagaacgccatttaggc
catgaagatagtggatctaaatttagagttttgcctcagccaactaatctcacagcctca
aacacaaagcgtttgaaaaaagaagaaattcctttaaattctgacatccttccagagttg
gttaacactcagagcccgtcagtttctcaagttgatgtagctgttacaattaacaagaaa
atagtgccccttgacttttctatgagttctttagctaaacaaataaagcggttacatcac
caagaacaaaaaagagcaggtgaacagaattataggaggtttagggcaaagatttgccct
ggagaaaatcaagcagcagaagatgaactaagaaaagagataagtaagacgatgtttgca
gaaatggaaatcattggccagtttaacttgggatttataataaccaaactggatgccgac
atcttcatagtggaccagcacgccacggatgagaaatacaacttcgagatgctccagcag
cacactgtgctccagggtcagaggctcatagcaccgcagactctcaacttaactgccgtc
aatgaagctgttctgatagaaaacctggaaatattccgaaagaatggctttgattttgtt
atcgatgaaggcgctccagtcactgaaagggctaaattgatttccttgccgaccagtaaa
aactggacctttggccctcaggacgtagatgaactgatcttcatgctgagtgacagccct
ggggtgatgtgccggccttcccgagtcaggcagatgtttgcctccagagcctgtcgaaag
tctgtgatgatcggaaccgcgctcaacgcgagcgagatgaggaagctcatcacccacatg
ggcgagatggaccacccctggaactgcccccacggaaggcccaccatgcggcacatcgcc
aacctggacgtcatttctccaaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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