KEGG   Escherichia coli O6 K2 H1 CFT073 (UPEC): c0905
Entry
c0905             CDS       T00106                                 
Symbol
ybiS
Name
(GenBank) Protein ybiS precursor
  KO
K19235  L,D-transpeptidase YbiS
Organism
ecc  Escherichia coli O6:K2:H1 CFT073 (UPEC)
Brite
KEGG Orthology (KO) [BR:ecc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ecc01002]
    c0905 (ybiS)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ecc01011]
    c0905 (ybiS)
Peptidases and inhibitors [BR:ecc01002]
 Cysteine peptidases
  Family C82
   c0905 (ybiS)
Peptidoglycan biosynthesis and degradation proteins [BR:ecc01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   c0905 (ybiS)
SSDB
Motif
Pfam: Ldt_C YkuD
Other DBs
NCBI-ProteinID: AAN79378
UniProt: P0AAX9
Position
complement(877177..878097)
AA seq 306 aa
MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVITIPEGNTQPLEYFAAEY
QMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTV
IVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPM
GLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKA
TTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKSVQTVTGQPDVDQVVLDEAIKNRSG
MPVRLN
NT seq 921 nt   +upstreamnt  +downstreamnt
atgaatatgaaattgaaaacattattcgcagcggccttcgctgttgtcggcttttgcagt
accgcctctgcggtaacttatcctctgccaaccgacgggagtcgcctggttggtcagaat
caggtgatcaccattcctgaaggtaacactcagccgctggagtattttgccgccgagtac
cagatgggactttccaatatgatggaagcgaacccgggtgtggataccttcctgccgaaa
ggcggtactgtactgaacattccgcagcagctgatcctgccggataccgttcatgaaggc
atcgtcattaacagtgcagagatgcgtctgtattactatccgaaaggaaccaacaccgtt
atcgtgctgccgatcggcattggtcagttaggcaaagacacgcctatcaactggaccacc
aaagttgagcgtaaaaaagcaggcccgacctggacgccgaccgccaaaatgcacgcagag
taccgcgctgcgggcgaaccgcttccggctgtcgttccagcaggtccggataacccgatg
ggtctgtatgcactctacatcggtcgcctgtacgctatccatggcaccaacgccaacttc
ggtatcggcctgcgtgtaagtcatggctgtgtgcgtctgcgtaacgaagacattaaattc
ctgttcgagaaagtgcctgtcggtactcgcgtgcagtttattgatgagccggtgaaagcg
actaccgaaccagacggcagccgttacattgaagtccataacccgctgtctaccaccgaa
gcccagtttgaaggtcaggaaattgtgccaattaccctgacgaagagcgtgcagacagtg
accggtcagccagatgttgaccaggttgttcttgatgaagcgatcaaaaatcgttccggg
atgccggttcgtctgaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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