KEGG   Escherichia coli O6 K2 H1 CFT073 (UPEC): c1050
Entry
c1050             CDS       T00106                                 
Symbol
himD
Name
(GenBank) Integration host factor beta-subunit
  KO
K05788  integration host factor subunit beta
Organism
ecc  Escherichia coli O6:K2:H1 CFT073 (UPEC)
Brite
KEGG Orthology (KO) [BR:ecc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ecc03032]
    c1050 (himD)
   03036 Chromosome and associated proteins [BR:ecc03036]
    c1050 (himD)
   03400 DNA repair and recombination proteins [BR:ecc03400]
    c1050 (himD)
DNA replication proteins [BR:ecc03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    c1050 (himD)
Chromosome and associated proteins [BR:ecc03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    c1050 (himD)
DNA repair and recombination proteins [BR:ecc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      c1050 (himD)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-DNA_bdg HU-CCDC81_euk_1 MDMPI_C FhbB
Other DBs
NCBI-ProteinID: AAN79520
UniProt: P0A6Y2
Position
1014789..1015073
AA seq 94 aa
MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
NT seq 285 nt   +upstreamnt  +downstreamnt
atgaccaagtcagaattgatagaaagacttgccacccagcaatcgcacattcccgccaag
acggttgaagatgcagtaaaagagatgctggagcatatggcctcgactcttgcgcagggc
gagcgtattgaaatccgcggtttcggcagtttctctttgcactaccgcgcaccacgtacc
ggacgtaatccgaagactggcgataaagtagaactggaaggaaaatacgttcctcacttt
aaaccaggtaaagaactgcgcgatcgcgccaatatttacggttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system