KEGG   Escherichia coli O6 K2 H1 CFT073 (UPEC): c2330
Entry
c2330             CDS       T00106                                 
Symbol
sdiA
Name
(GenBank) Regulatory protein sdiA
  KO
K07782  LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
ecc  Escherichia coli O6:K2:H1 CFT073 (UPEC)
Pathway
ecc02020  Two-component system
ecc02024  Quorum sensing
ecc02026  Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:ecc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    c2330 (sdiA)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    c2330 (sdiA)
   02026 Biofilm formation - Escherichia coli
    c2330 (sdiA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecc03000]
    c2330 (sdiA)
Transcription factors [BR:ecc03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    c2330 (sdiA)
SSDB
Motif
Pfam: Autoind_bind GerE Sigma70_r4_2 HTH_20 Sigma70_r4 HTH_10 HTH_23
Other DBs
NCBI-ProteinID: AAN80789
UniProt: A0A0H2V844
Position
complement(2144786..2145520)
AA seq 244 aa
MRFTMQDTDFFSWLRTMLLRFQRMEAAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPK
VAFYTNYPESWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLR
RGVTQYLMLPNRALGFLSFSRCSTREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP
EMNFSKREKEILKWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA
TGLI
NT seq 735 nt   +upstreamnt  +downstreamnt
ttgcggtttactatgcaggatacggattttttcagctggcttcgcacgatgttgttgcgt
tttcagaggatggaggccgcagaagaggtctaccatgaaatagagcttcaggctcagcag
ctggagtacgattactattcgttatgtgttcgccacccggtaccattcacgcgacctaaa
gtggctttctacaccaattaccctgagtcgtgggttagttattatcaggcaaaaaatttt
ctcgcaattgatccggtgctgaaccctgaaaactttagtcagggccatttaatgtggaat
gatgacttattcagcgaagcacagccgttatgggaagctgcgcgcgcacatggtttacgc
cgcggtgtcactcagtatttaatgctgccaaatcgggcgttgggctttttgtccttttcc
cgttgcagcacgcgcgaaatacccattcttagtgatgaactgcaattaaaaatgcagcta
ctggtgcgcgaaagtctgatggctctgatgcgtttaaatgatgaaatagtgatgacgcca
gagatgaatttcagcaagcgcgaaaaagaaattctgaaatggacggcggaaggtaagaca
tcagcagagatagcgatgattttgtcaatctctgagaatacggtcaatttccatcagaaa
aacatgcagaaaaaaatcaatgcaccgaataagacgcaggttgcctgttacgcggccgct
actggcttaatttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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