KEGG   Escherichia coli O6 K2 H1 CFT073 (UPEC): c3263
Entry
c3263             CDS       T00106                                 
Symbol
ygaA
Name
(GenBank) Hypothetical sigma-54-dependent transcriptional regulator ygaA
  KO
K12266  anaerobic nitric oxide reductase transcription regulator
Organism
ecc  Escherichia coli O6:K2:H1 CFT073 (UPEC)
Brite
KEGG Orthology (KO) [BR:ecc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecc03000]
    c3263 (ygaA)
Transcription factors [BR:ecc03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    c3263 (ygaA)
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 GAF GAF_2 Mg_chelatase AAA_5 MCM AAA GAF_3 AAA_19 AAA_2 AAA_22 AAA_16 HTH_8 AAA_30
Other DBs
NCBI-ProteinID: AAN81714
UniProt: Q8FEN6
Position
complement(3113245..3114834)
AA seq 529 aa
MSSQNDYQSNGRYDNIYSQIDSEAKMSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQV
LECDASALLRYDSRQFIPLAIDGLAKDVLGRRFALEGHPRLEAIARAGDVVRFPADSELP
DPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAG
ALSNALLIEQLESQNMLPGEAAPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISG
ETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKF
EMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEV
LAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRLGLSRVVLSAGARNLL
QHYNFPGNVRELEHAIHRAVVLARATRSGDEVILEAQHFAFPEVTLPPPEVAAVPVVKQN
LREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGLKD
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgagtagtcaaaatgactatcaatcaaatggtcgatatgacaatatctatagtcaaatt
gacagtgaggcaaagatgagtttttccgttgatgtgctggcgaatatcgccatcgaattg
cagcgtgggattggtcatcaggatcgttttcaacgcctgatcaccacgctgcgtcaggtg
ctggagtgcgatgcgtctgcgttgctacgttacgactcgcggcagtttattccgcttgcc
atcgacgggctggcgaaggatgtactcggtagacgctttgcgctggaagggcatccacgg
ctggaagcgattgcccgcgcgggtgatgtggtgcgctttcccgcagacagcgaattgccc
gatccttatgacggtttgattccagggcaggagagtctgaaggttcacgcctgcgttggt
ttgccgttgtttgccgggcaaaacctgatcggtgccttgacgctcgacgggatgcagccc
gatcagttcgatgttttcagcgacgaagagttacgcctgattgctgcgctggcggcggga
gcgttaagcaatgcgttactgattgaacaactggaaagccagaatatgctgccaggcgaa
gccgcgccgtttgaagcggtgaaacagacgcagatgatcggtctgtcgccaggcatgacg
caattgaaaaaagagattgagattgtggcggcatccgatctcaacgttttaattagcggt
gagacgggaaccggtaaggagctggtggcgaaagcgattcatgaagcctcgccacgggcg
gtgaatccgctggtctatctcaactgtgccgcactgccggaaagtgtggcggaaagtgag
ttgttcgggcatgtgaaaggggcgtttactggtgctatcagtaaccgcagcgggaagttt
gaaatggcggataacggcacgctgtttctcgatgagatcggcgagttgtcgttggcattg
caggccaagctgctgagggtgttgcagtatggcgatattcaacgcgttggcgatgaccgc
agtttgcgggtcgatgtgcgcgtgctggcggcgactaaccgtgacttacgcgaagaggta
ctggcagggcgatttcgcgctgacttgttccaccgcctgagcgtgtttccactttcagtg
ccgccgctgcgtgagcggggcgatgatgtcattctgctggcggggtatttctgcgagcag
tgtcgtttgcggctggggctctcccgagtggtattaagtgccggagcgcgaaatttactg
caacactacaattttccggggaacgttcgtgaactggaacatgctattcatcgggcggta
gtgctggcgagagcaacccgcagcggcgatgaagtgattcttgaggcgcaacattttgct
tttcctgaggtgacgttgccgccgccagaagtggcggcggtgcccgttgttaagcaaaac
ctgcgtgaagcgacagaagcgttccagcgtgaaaccattcgtcaggcactggcgcaaaat
catcacaactgggccgcctgtgcgcggatgctggaaaccgacgtcgccaacctgcatagg
ctggcgaaacgtctggggctgaaggattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (15)   
   Pfam (15)   
All databases (23)   

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