KEGG   Escherichia coli K-12 DH10B: ECDH10B_1643
Entry
ECDH10B_1643      CDS       T00666                                 
Symbol
lsrR
Name
(GenBank) lsr operon transcriptional repressor
  KO
K11531  lsr operon transcriptional repressor
Organism
ecd  Escherichia coli K-12 DH10B
Pathway
ecd02024  Quorum sensing
ecd02026  Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:ecd00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ECDH10B_1643 (lsrR)
   02026 Biofilm formation - Escherichia coli
    ECDH10B_1643 (lsrR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecd03000]
    ECDH10B_1643 (lsrR)
Transcription factors [BR:ecd03000]
 Prokaryotic type
  Other transcription factors
   Others
    ECDH10B_1643 (lsrR)
SSDB
Motif
Pfam: Sugar-bind MarR_2 HTH_Crp_2 Sigma70_r4 HTH_24 HTH_37 HTH_23 HTH_CodY MarR HTH_IclR Crp
Other DBs
NCBI-ProteinID: ACB02722
UniProt: B1XEA0
Position
complement(1687937..1688890)
AA seq 317 aa
MTINDSAISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGII
RVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRLGIGAAHMLMSLLQPQQML
AIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIGQLNAACSVNIIPAPLRASS
ADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGA
VGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGY
INALVTDQDTAAAILRS
NT seq 954 nt   +upstreamnt  +downstreamnt
atgacaatcaacgattcggcaatttcagaacagggaatgtgtgaagaagaacaggtcgcg
cggatcgcgtggttttactatcacgacgggctgacccagagcgagatcagcgatcgtctc
ggcctgacacgtttgaaagtgtcgcgattgctggagaaagggcatcagtccggcattatt
cgcgtacagattaattctcgctttgaaggctgtctggaatatgaaactcaattacgtcgt
cagttttcgctgcaacatgtccgggtgatccctgggcttgcggatgctgatgtcggtggg
cgactggggataggcgcggcgcatatgttgatgagtttacttcaaccacaacagatgctg
gcgattggttttggcgaggcaaccatgaatacgctgcaacgcttaagtggttttatttcg
tcacagcaaattcgcctggtcacgctctccggtggcgtcggttcttatatgacgggaatc
gggcagcttaacgcggcgtgcagtgtgaatattattccggctccgttgcgggcatcctcc
gctgacattgcccgtacgctaaaaaatgaaaattgcgtcaaagatgttctgttagccgcg
caagcagcggatgtggcgattgtcggcattggtgctgtgagtcaacaggacgatgcgaca
atcattcgctccggttatatcagccagggcgaacagttaatgattggccgaaaaggggcg
gttggcgacattttaggctacttttttgatgcaaaaggtgacgttgtcacgaatatcaaa
atacataacgaactgattggcttacctttaagcgcgctgaagaccatacccgtccgggtt
ggcgtggcagggggagaaaataaagccgaagcaattgccgctgcaatgaaaggcggttat
atcaacgcactggttaccgatcaggacacagcagcggcgattttacgtagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

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