KEGG   Escherichia coli K-12 DH10B: ECDH10B_4001
Entry
ECDH10B_4001      CDS       T00666                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ecd  Escherichia coli K-12 DH10B
Pathway
ecd00300  Lysine biosynthesis
ecd00470  D-Amino acid metabolism
ecd01100  Metabolic pathways
ecd01110  Biosynthesis of secondary metabolites
ecd01120  Microbial metabolism in diverse environments
ecd01230  Biosynthesis of amino acids
Module
ecd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ecd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    ECDH10B_4001 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    ECDH10B_4001 (dapF)
Enzymes [BR:ecd01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     ECDH10B_4001 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: ACB04834
UniProt: B1XAH6
Position
4091705..4092529
AA seq 274 aa
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttctcgaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcaccggagctgattcgtcgcctggctgatcggcacctgggggta
gggtttgaccaactgctggtggttgagccgccgtatgatcctgaactggattttcactat
cgcattttcaatgctgatggcagtgaagtggcgcagtgcggcaacggtgcgcgctgcttt
gcccgttttgtgcgtctgaaaggactgaccaataagcgtgatatccgcgtcagcaccgcc
aacgggcggatggttctgaccgtcaccgatgatgatctggtccgcgtaaatatgggcgaa
cccaacttcgaaccttccgccgtgccgtttcgcgctaacaaagcggaaaagacctatatt
atgcgcgccgccgagcagacaatcttatgcggcgtggtgtcgatgggaaatccgcattgc
gtgattcaggtcgatgatgtcgataccgcggcggtagaaacgcttggtcctgttctggaa
agccacgagcgttttccggagcgcgccaatatcggttttatgcaagtggttaagcgcgag
catattcgtttacgcgtttatgagcgtggggcaggagaaacccaggcctgcggcagcggc
gcgtgtgcggcggttgcagtagggattcagcaaggtttgctggccgaagaagtacgcgtg
gaactccccggcggtcgtcttgatatcgcctggaaaggtccgggtcacccgttatatatg
actggcccggcggtacatgtctacgacggatttattcatctatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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