KEGG   Escherichia coli O157 H7 EC4115 (EHEC): ECH74115_3788
Entry
ECH74115_3788     CDS       T00778                                 
Name
(GenBank) sigma-54 dependent response regulator
  KO
K07715  two-component system, NtrC family, response regulator GlrR
Organism
ecf  Escherichia coli O157:H7 EC4115 (EHEC)
Pathway
ecf02020  Two-component system
ecf02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ecf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ECH74115_3788
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ECH74115_3788
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:ecf02022]
    ECH74115_3788
Two-component system [BR:ecf02022]
 NtrC family
  GlrK-GlrR (amino sugar metabolism)
   ECH74115_3788
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 AAA AAA_2 HTH_8 Glycos_transf_1 AAA_16 AAA_3 FAD_binding_2 AAA_7
Other DBs
NCBI-ProteinID: ACI36734
Position
complement(3511952..3513286)
AA seq 444 aa
MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKVDLVISDLRMD
EMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYQAIDDA
LEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSVLINGQSGTGKEIFAQAIHNA
SPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDM
PAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLPKAMARGEFREDLYYRLNVV
SLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVI
EQCVALTSSPVISDALVEQALEGENTALPTFVEARNQFELNYLRKLLQITKGNVTHAARM
AGRNRTEFYKLLSRHELDANDFKE
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagccataaacctgcgcatttattattggtcgatgacgatccgggattgctgaaactg
cttggcctgcgcctgaccagcgaaggctacagcgtggtcacggcggaaagtggcgctgaa
ggattacgggtactgaatcgcgaaaaagtagatttagtcatcagcgacctgcggatggat
gaaatggacggtatgcagctgtttgctgaaatccagaaagtgcagccgggaatgccggta
attattcttaccgcgcatggttctattcccgatgccgttgctgcaacacagcagggcgtt
tttagtttcctcaccaagcctgttgataaagacgcgctatatcaggcaattgatgatgcg
ctggaacaatccgcgccagccaccgacgaacgctggcgcgaggcgattgtcacccgcagc
ccgctgatgctgcgtttgctggaacaggcgcggctggtggcgcaatcagacgtcagcgtt
ttgattaatggccagagcggcaccgggaaagagattttcgcccaggctatccacaacgcc
agcccgcgcaatagcaaaccatttattgctattaactgtggtgcattgcctgagcaattg
ctggagtcggagctgtttggtcatgcgcgtggcgcgtttactggcgctgtcagcaatcgc
gaaggtttattccaggcggcggaaggcggaacgctatttctcgatgagattggcgatatg
cctgcgccgttgcaggtcaaactgttgcgcgtgttgcaggagcgtaaagtgcgcccgctg
ggcagtaaccgcgatattgatatcaatgtgcggattatttctgccactcaccgtgatctg
ccaaaagcgatggcgcgcggggaattccgcgaagatctctattaccgcctcaacgttgtc
agcctgaaaattccggcactggcggagcgcacagaagacattccgctactggcaaatcac
ctgttgcgccaggcggcagagcgacataaaccgtttgtccgcgcgttttccaccgatgcg
atgaaacgcctgatgaccgcgagctggccgggtaatgtgcgccagttggtcaacgtgatt
gaacagtgcgtggcgctgacctcatctccggtgattagcgatgcattagtagagcaggcg
ctggagggtgaaaatacggcgctgccaacctttgttgaggcacgtaatcagtttgaactc
aactatttgcgtaagctgctgcaaattaccaaaggcaacgtcacccacgcggcgagaatg
gcggggcgcaaccggacagaattttataaactgctttcccgacacgagctggatgcaaac
gatttcaaggaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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