KEGG   Escherichia coli O157 H7 EC4115 (EHEC): ECH74115_4183
Entry
ECH74115_4183     CDS       T00778                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ecf  Escherichia coli O157:H7 EC4115 (EHEC)
Pathway
ecf03410  Base excision repair
ecf03430  Mismatch repair
ecf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ecf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ECH74115_4183 (recJ)
   03430 Mismatch repair
    ECH74115_4183 (recJ)
   03440 Homologous recombination
    ECH74115_4183 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecf03400]
    ECH74115_4183 (recJ)
DNA repair and recombination proteins [BR:ecf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     ECH74115_4183 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     ECH74115_4183 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      ECH74115_4183 (recJ)
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB PEP-utilizers
Other DBs
NCBI-ProteinID: ACI38898
Position
complement(3878919..3880652)
AA seq 577 aa
MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKA
VEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPE
VVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGDTLPAAEAIINPNLR
DCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIAIPNLAELLDLVALGTVADVVPL
DANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQIEALTLCEKLERSRDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GMMLKFGGHAMAAGLSLEEDKFELFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTME
VAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTA
LWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI
NT seq 1734 nt   +upstreamnt  +downstreamnt
gtgaaacaacagatacaacttcgtcgccgtgaagtcgatgaaacggcagacttgcccgcg
gaattgcctcccttgctgcgccgtttatacgccagccggggagtacgcagtgcgcaagaa
ctggaacgcagtgttaaaggtatgctgccctggcagcaactgagcggcgtcgaaaaggcc
gttgagatcctttacaacgcttttcgcgaaggaacgcggattattgtggtcggtgatttc
gacgccgacggtgccaccagcacggctctaagcgtgctggcgatgcgctcgcttggttgc
agcaatatcgactacctggtaccaaaccgtttcgaagacggttacggcttaagcccggaa
gtggtcgatcaggcccatgcccgtggcgcgcagttaattgtcacggtggataacggtatt
tcctcccatgcgggagttgagcacgctcgctcgttgggcatcccggttattgttaccgat
caccatttgccgggcgacacattacccgcagcggaagcgatcattaaccctaacttgcgc
gactgtaatttcccgtcgaaatcactggcaggcgtgggtgtggcgttttatctgatgctg
gcgctgcgcacctttttgcgcgatcagggctggtttgatgagcgcggcatcgcaattcct
aacctggcagaactgctggatctggtcgcgctggggacagtggcggacgtcgtgccgctg
gacgctaataatcgcattctgacctggcaggggatgagtcgcatccgtgccggaaagtgc
cgtccagggattaaagcgctgctggaagtggcaaaccgtgatgcacaaaaactcgccgcc
agcgatttaggttttgcgctggggccacgtctcaatgctgccgggcgactggacgatatg
tccgtcggtgtggcgctgttgctgtgcgacaacatcggcgaagcgcgcgtgctggcaaat
gaactcgatgcgctaaatcagacgcgaaaagagatcgaacaaggaatgcagattgaagcc
ttgaccctgtgcgagaaactggagcgaagtcgcgacacgctacccggcgggctggcaatg
tatcaccccgaatggcatcagggcgttgtcggtattctggcttcgcgcatcaaagagcgt
tttcaccgtccggttatcgcctttgcgccagcaggtgatggtacgctgaaaggttccggt
cgctccattcaggggctgcatatgcgtgatgcgctggagcgattagacacactctacccc
ggtatgatgctgaagtttggcggtcatgcgatggcggcgggtttgtcgctggaagaggat
aaattcgaactctttcaacaacggtttggcgagttggttaccgagtggctggacccttcg
ctattgcaaggcgaagtggtgtcagacggcccgttaagcccggccgaaatgaccatggaa
gtggcgcagctgctgcgcgatgctggcccgtgggggcagatgttcccggagccgctgttt
gatggtcatttccgtctgctgcaacagcggctggtgggcgaacgtcatttgaaagtcatg
gtcgaaccggtcggcggcggtccgctgctggatggtattgcttttaatgtcgataccgcc
ctctggccggataacggcgtgcgcgaagtgcaactggcttacaagctcgatatcaacgag
tttcgcggcaaccgcagcctgcaaattatcatcgacaatatctggccaatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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