KEGG T00778: ECH74115

Escherichia coli O157 H7 EC4115 (EHEC): ECH74115_5823

Entry

ECH74115_5823     CDS       T00778

Symbol

fimD1

Name

(GenBank) outer membrane usher protein fimD

K07347

outer membrane usher protein

Organism

ecf Escherichia coli O157:H7 EC4115 (EHEC)

Pathway

ecf02020

Two-component system

Brite

KEGG Orthology (KO) [BR:ecf00001]
09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ECH74115_5823 (fimD1)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ecf02000]
    ECH74115_5823 (fimD1)
   02044 Secretion system [BR:ecf02044]
    ECH74115_5823 (fimD1)
   02035 Bacterial motility proteins [BR:ecf02035]
    ECH74115_5823 (fimD1)
Transporters [BR:ecf02000]
Other transporters
  Pores ion channels [TC:1]
   ECH74115_5823 (fimD1)
Secretion system [BR:ecf02044]
Chaperone-usher system
  Type 1 pilus assembly protein
   ECH74115_5823 (fimD1)
Bacterial motility proteins [BR:ecf02035]
Pilus system
  Fimbrial proteins
   ECH74115_5823 (fimD1)

SSDB

Motif

Pfam:

Usher PapC_N PapC_C

Other DBs

NCBI-ProteinID:

ACI36488

Position

5473635..5476271

AA seq 878 aa
MSYLNLRLYQRNTQCLHIRKHRLAGFFVRLFVACAFAVQAPLSSAELYFNPRFLADDPQA
VADLSRFENGQELPPGTYRVDIYLNNGYMATRDVTFNTGDSEQGIVPCLTRAQLASMGLN
TASVAGMNLLADDACVPLTTMVQDATAHLDVGQQRLNLTIPQAFMSNRARGYIPPELWDP
GINAGLLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSSDRSSGSK
NKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASDDNMLPDSQRGFAPV
IHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTV
PYSSVPLLQREGHTRYSITAGEYRSGNAQQEKPRFFQSTLLHGLPAGWTIYGGTQLADRY
RAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSLNESGTNIQLVGYR
YSTSGYFNFADTTYSRMNGYNIETQDGVIQVKPKFTDYYNLAYNKRGKLQLTVTQQLGRS
STLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLARNVNI
PFSHWLRSDSKSQWRHASASYSMSHDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGD
GNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGVLAHANGVTLGQPLNDTVVL
VKAPGAKDAKVENQTGVRTDWRGYAVLPYATEYRENRVALDTNTLADNVDLDNAVANVVP
TRGAIVRAEFKARVGIKLLMTLTHNNKPLPFGAMVTSESSQSSGIVADNGQVYLSGMPLA
GKVQVKWGEEENAHCVANYQLPPESQQQLLTQLSAECR

NT seq 2637 nt +upstreamnt +downstreamnt
atgtcatatctgaatttaagactttaccagcgaaacacacaatgcttgcatattcgtaag
catcgtttggctggtttttttgtccggctctttgtcgcctgtgcttttgccgtacaggca
cctttgtcatctgccgaactctattttaatccgcgctttttagcggatgatccccaggct
gtggccgatttatcgcgttttgaaaatgggcaagaattaccgccagggacgtatcgcgtc
gatatctatttgaataatggttatatggcaacgcgtgatgtcacatttaatacgggcgac
agtgaacaagggattgttccctgcctgacacgcgcgcaactcgccagtatggggctgaat
acggcttctgtcgccggtatgaatctgctggcggatgatgcctgtgtgccattaaccaca
atggtccaggacgctactgcgcatttagatgttggtcagcagcgactgaacctgacgatc
cctcaggcatttatgagtaatcgcgcgcgtggttatattcctcctgagttatgggatccc
ggtattaatgccggattgctcaattataatttcagcggaaatagtgtacagaatcggatt
gggggtaacagccattatgcatatttaaacctacagagtgggttaaatattggtgcgtgg
cgtttacgcgacaataccacctggagttataacagtagcgacagatcatcaggtagcaaa
aataaatggcagcatatcaatacctggcttgagcgagacataataccgttacgttcccgg
ctgacgctgggtgatggttatactcagggtgatattttcgatggtattaactttcgcggc
gcacaattggcctcagatgacaatatgttacccgatagccaaagaggatttgccccggtg
atccacggtattgctcgtggtactgcacaggtcactattaaacaaaatgggtatgacatt
tataatagtacggtgccgccggggccttttaccatcaacgatatctatgccgcaggtaat
agtggtgacttgcaggtaacgattaaagaggctgacggcagcacgcagatttttaccgta
ccctattcgtcagtcccgcttttgcaacgtgaagggcatactcgttattccattacggca
ggagaataccgtagtggaaatgcgcaacaggaaaaaccccgctttttccaaagtacatta
ctccacggccttccagctggctggacaatatatggtggaacgcaactggcagatcgttat
cgtgcttttaattttggtatcgggaaaaatatgggggcactgggcgctctgtctgtggat
atgactcaggctaattccacacttcccgatgacagtcagcatgacggacaatcggtgcgt
tttctctataacaaatcgctcaatgagtcaggcacgaatattcagttagtgggttaccgt
tattcgaccagcggatattttaatttcgctgatacaacatacagtcgaatgaatggctac
aacatcgaaacacaggacggagttattcaggttaagccgaaattcaccgactattacaac
ctcgcttataacaaacgcgggaaattacaactcaccgttactcagcaactcgggcgctca
tcaacactgtatttgagtggtagccatcaaacttattggggaacgagtaatgtcgatgag
caattccaggctggattaaatactgcgttcgaagatatcaactggacgctcagctatagc
ctgacgaaaaacgcctggcaaaaaggacgtgatcagatgttagcgcgtaacgtcaatatt
cctttcagccactggctgcgttctgacagtaaatctcagtggcgacatgccagtgccagc
tacagcatgtcacacgatctcaacggtcggatgaccaatctggctggtgtatacggtacg
ttgctggaagacaacaacctcagctatagcgtgcaaaccggctatgccgggggaggcgat
ggtaatagcggaagcacaggctacgccacgctgaattatcgcggtggttacggcaatgcc
aatatcggttacagccatagcgatgatattaagcagctctattacggagtcagcggtggg
gtactggctcatgccaatggcgtaacgctggggcagccgttaaacgatacggtggtgctt
gttaaagcgcctggcgcaaaagatgcaaaagtcgaaaaccagacgggggtgcgtaccgac
tggcgcggttatgccgtgctgccttatgccactgaatatcgggaaaatagagtggcgctg
gataccaataccctggctgataacgtcgatttagataacgcggtcgctaacgttgttccc
actcgtggggcgatcgtgcgagcagagtttaaagcgcgcgttgggataaaactgctcatg
acgctaacccacaataataagccgctgccgtttggggcgatggtgacatcagagagtagc
cagagtagcggcattgttgcggataatggtcaggtttacctcagcggaatgcctctagcg
ggaaaagttcaggtgaaatggggagaagaggaaaatgctcattgtgtcgccaattatcaa
ctgccaccagagagtcagcagcagttattaacccagctatcagctgaatgtcgttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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