KEGG   Escherichia coli O127 H6 E2348/69 (EPEC): E2348C_2850
Entry
E2348C_2850       CDS       T00796                                 
Symbol
rpoE
Name
(GenBank) RNA polymerase, sigma 24 (sigma E) factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
ecg  Escherichia coli O127:H6 E2348/69 (EPEC)
Brite
KEGG Orthology (KO) [BR:ecg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecg03021]
    E2348C_2850 (rpoE)
Transcription machinery [BR:ecg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     E2348C_2850 (rpoE)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_20 HTH_28
Other DBs
NCBI-ProteinID: CAS10398
UniProt: B7UH13
Position
complement(2939100..2939675)
AA seq 191 aa
MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQEAFIKAYRA
LDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPEN
LMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREA
IDNKVQPLIRR
NT seq 576 nt   +upstreamnt  +downstreamnt
atgagcgagcagttaacggaccaggtcctggttgaacgggtccagaagggagatcagaaa
gcctttaacttattggtagtgcgctatcagcataaagtggcgagtctggtttcccgctat
gtgccgtcgggtgatgttcccgatgtggtacaagaagcttttattaaagcctatcgtgcg
ctggattcgttccggggagatagcgctttttatacatggctgtatcggattgctgtaaat
acagcgaaaaattacctggttgctcaggggcgtcgtccaccttccagtgatgtggatgcc
attgaagctgaaaacttcgaaagtggcggcgcgttgaaagaaatttcgaaccctgagaac
ttaatgttgtcagaagaactgagacagatagttttccgaactattgagtccctcccggaa
gatttacgcatggcaataaccttgcgggagctggatggcctgagctatgaagagatagcc
gctatcatggattgtccggtaggtacggtgcgttcacgtatcttccgagcgagggaagct
attgataacaaagttcaaccgcttatcaggcgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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