KEGG T00328: ECH

Ehrlichia chaffeensis Arkansas: ECH_0200

Entry

ECH_0200          CDS       T00328

Symbol

rho-2

Name

(GenBank) transcription termination factor Rho

K03628

transcription termination factor Rho

Organism

ech Ehrlichia chaffeensis Arkansas

Pathway

ech03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:ech00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ECH_0200 (rho-2)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ech03021]
    ECH_0200 (rho-2)
   03019 Messenger RNA biogenesis [BR:ech03019]
    ECH_0200 (rho-2)
Transcription machinery [BR:ech03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     ECH_0200 (rho-2)
Messenger RNA biogenesis [BR:ech03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ECH_0200 (rho-2)

SSDB

Motif

Pfam:

ATP-synt_ab Rho_RNA_bind Rho_N OB_RNB AAA Spore_III_AA AAA_25 AAA_22

Other DBs

NCBI-ProteinID:

ABD44973

UniProt:

P0CH93

Position

190408..191676

AA seq 422 aa
MLDLSELKKKTIEDLLKIAEDLGVVSNGRMLKQEIIFHLMKKVVSDGGAAIGGGVVEILS
DGFGFLRSPEANYAASGDDVYISAGQIKKFNLRTGDIVSGEIRAPSEKERYFTLVKAHSI
NFTDMAKLQRYVHFDDLIPLYPEERILLECNDPISVSKKDISMRVIDIVAPLGKGQRALI
VAPPRAGKTIILQQIAHSISVNHPDIELIVLLIGERPEEVTDMCRSVKGEVVSSTFDEPG
YRHVQLAEIVIEKAKRMVEHKKNVVILLDSITRLARAYNSVIPSSGKVLTGGVDSNALQR
PKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNCEIILDRKISDKRVYP
AIDISKSGTRKEDMLIDSVCLKKVWLLRRLLSSMGSVEAMEFLRDKLLITKDNNEFFDMM
NS

NT seq 1269 nt +upstreamnt +downstreamnt
gtgttagatctgagtgagctaaaaaagaagacaatagaagatttgttgaaaatagcagaa
gaccttggagtggttagtaatggtagaatgctgaaacaagaaataatatttcacttaatg
aaaaaagtagtaagtgatggaggtgcagcaataggaggaggggtagtagagatattatct
gatggttttggattcttaaggtctcctgaagcaaattatgctgcaagtggtgatgatgta
tatatttctgcaggacaaataaaaaagtttaatttaagaacaggtgatatagtaagtggt
gaaataagagcgccaagtgagaaagaaaggtattttacgttagtaaaagcacatagtata
aactttacagatatggcaaagttacaaagatatgtacactttgatgatttaatacctttg
tatccagaagaaagaatattattagaatgtaatgatcctatcagcgtgagtaaaaaagat
ataagcatgagagtaatagatatagttgctccattaggtaaaggacaaagagcgctgata
gttgctccaccaagagcaggaaaaacaataatattacaacaaatagcacattcaatatct
gtaaatcatccagatatagaattgatagttttacttataggtgaaagaccagaagaagtg
acagatatgtgtagatctgtgaaaggagaggtagtaagttctacatttgatgaacctgga
tatagacatgtacaacttgcagaaattgtaatagaaaaagcaaaaagaatggtagaacat
aaaaagaatgtagtgatattacttgattcaattacaagattagcaagagcatataattca
gtaataccgtcatcaggaaaagtattaactggtggagtagattctaatgctttacaaaga
ccaaaaagattttttggagcggcaagaaatatagagaatggaggatcattgacaataata
gcaacggcactgattgaaacagggtcaaaaatggatgaagtgatatttgaagaatttaaa
ggtacaggaaattgtgaaataatattagatagaaaaatatctgataaaagagtatatcca
gcaatagatatttcaaaatctggtacaaggaaagaagatatgttgatagatagtgtgtgt
ttgaagaaagtatggttattaagaaggctattgtcatcgatgggatctgttgaagcaatg
gaatttttaagggataaattgttgataaccaaagacaataatgaattctttgatatgatg
aatagttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

Download RDF

DBGET integrated database retrieval system