KEGG T03365: ECHWP

Ehrlichia chaffeensis West Paces: ECHWP_0659

Entry

ECHWP_0659        CDS       T03365

Symbol

topA

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

echp Ehrlichia chaffeensis West Paces

Brite

KEGG Orthology (KO) [BR:echp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:echp03032]
    ECHWP_0659 (topA)
   03400 DNA repair and recombination proteins [BR:echp03400]
    ECHWP_0659 (topA)
Enzymes [BR:echp01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     ECHWP_0659 (topA)
DNA replication proteins [BR:echp03032]
Prokaryotic type
  DNA Topoisomerases
   ECHWP_0659 (topA)
DNA repair and recombination proteins [BR:echp03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      ECHWP_0659 (topA)

SSDB

Motif

Pfam:

Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom Toprim_2 Toprim_4

Other DBs

NCBI-ProteinID:

AHX10229

Position

complement(744562..747024)

AA seq 820 aa
MSLIIVESPSKAKTISKYLGSKYKVVASFGHIRDFPAKSGSVDPDKDFAMTYEIISKSEK
YVNKLIQVANKETQGIYLATDPDREGEAIAWHIIEVLKENNAIDDNVVINRMVFNEVTKS
AILESIKRPRSINMDLVYAQQARRALDYLVGFTLSPLLWRKLPGSKSAGRVQSVALRLIC
DRESDIEKFITQEYWDIEAKCCNTEGKQFSAFLSCYAGKKLEKFDIKNEEDAQKLSEEVR
SRSYSVINVEKKHTKRNPYPPFITSSLQQEASTKLGFTAKNTMLIAQKLYEGIDVGGEIV
GLITYMRTDGFYIADEALEHIRSIIVSMFGKEYLPESARKYVKKVKNAQEAHEAIRPTNI
TITPGSLSNYLTPEQLKLYDLIWKRTVASQMNSAVIDQVIAELGSLDKVVTLRATGSSLF
FDGFYKVYGHGEDDDSKNNMLPLLQKNDKCPLDEVVPHQHFTNPPARYNEASLVKKMEEI
GIGRPSTYASIISVLQDRQYVILNQKRFFPTERGRIVNVFLVNFFSRYVEYDFTADLEEK
LDLISNGKINWKEVLHQFWFLFIDNVNSVKKLEFTEVLKVISCEMENYIFSSDKSESSRV
CPVCNDGTLELNISKNGIFLGCSKYPECKYTKNVGSGIVDDTDNTQYPKILGIDAATGQE
IYLKKGPYGLYLQIGNDKSGKRAAIPKNIDANLLDLQMAEKILSLPISLGTHPDTGQEIK
LGLGKFGAYILYGGKYFSVKNEHNFLDISIENAINIIANNSTSGVIKSLGITEDNKEVFL
CKGRYGFYLKYDKLNVALKKDTDIEQISLSDAIKLISEKL

NT seq 2463 nt +upstreamnt +downstreamnt
atgagtttaattatagtagaatccccatctaaagcaaaaactataagtaaatatttaggt
agcaagtataaagttgttgcatcatttgggcatattagggattttccagcaaaaagtggt
tctgttgatccggataaagatttcgctatgacttatgaaattattagtaagtcagaaaaa
tatgtaaataagttaattcaggtagctaataaggaaacacaaggaatttatcttgcaact
gatccagatcgtgagggtgaagcaatagcatggcatattatagaagtattgaaggaaaat
aatgctattgatgataatgttgtaattaatagaatggtttttaatgaggtaactaaaagt
gctattcttgaatctataaaacgcccaagaagtatcaatatggatcttgtgtatgcacag
caagcacgtagagcattagattatttagttggttttacgttatctcctttattatggaga
aaacttccgggtagtaaatctgctggtagagttcaatctgttgctttaaggttaatatgt
gacagggaaagtgatattgaaaagttcattacacaagaatattgggatattgaggctaaa
tgttgcaatacagaaggtaagcagttttctgcatttttaagttgctatgctggtaaaaaa
ttagagaagtttgatattaagaatgaagaagatgcacaaaagttgtcagaagaagtaaga
tctcgtagttattctgttataaatgttgagaaaaagcatacaaagcgtaatccttatcct
ccttttattacatcaagtttacagcaagaagcatcaacaaagcttggatttactgcaaaa
aatactatgcttattgctcaaaaactgtatgaaggaattgatgttggaggggaaattgtt
ggactcattacttatatgaggacggatggattttatattgcagatgaagcattagagcat
attaggagtatcattgtttctatgtttggtaaagaatatttaccggaatctgctcgcaag
tatgtgaaaaaggtaaaaaatgctcaagaagcacatgaagcaattagaccaacgaatatt
acaattactcctggtagtttatcaaattatctcactccagagcaactcaagctttatgat
cttatatggaaaaggactgttgcaagtcagatgaattctgctgtaattgatcaggttata
gcagaattagggtcgctggataaagtagtaactttgcgagccacaggttcttccttgttt
tttgatggattttataaggtgtatggtcatggtgaggatgatgacagtaaaaataatatg
ctaccgttacttcaaaaaaatgataaatgccctttagatgaagtggtacctcatcaacat
tttactaatcctcctgctagatataatgaagcaagtttagtgaagaaaatggaggaaata
gggataggaaggccttctacttatgcttctattatttctgtattgcaagatagacagtat
gttatactaaatcaaaaaagattttttccaacagagagaggtagaatagtaaatgttttt
cttgttaacttttttagtcgctatgtagaatatgattttactgctgaccttgaagaaaag
ttggatttaatctctaatgggaagattaattggaaggaagtactacatcaattctggttt
ctgtttattgataatgttaattcagtaaaaaaactagaatttactgaagtattaaaagtt
attagttgtgagatggaaaattatattttttcttctgataaatctgaatctagtagagta
tgtcctgtatgtaatgatggaacattagagcttaatattagtaagaatggtattttttta
ggatgttctaaatatccagagtgtaagtatacaaaaaatgttggaagtggtattgttgat
gatacagacaatacacaatatcctaaaatattaggtattgatgctgcaacaggacaagaa
atatatcttaaaaaaggtccgtatggtctctatttacagattggtaatgataaaagtggt
aaacgtgcagctattccaaaaaatatagatgctaatttattagatttgcaaatggcagaa
aaaatattaagtttacctataagcttaggtactcatccggatactggtcaagaaattaag
ttaggacttggtaagtttggtgcatacatattgtatggtggtaagtatttttcagtaaaa
aatgagcataattttttagatattagcattgaaaacgctattaatattattgcgaataat
tctacaagtggggttataaagtctctgggtatcactgaagataataaagaagtattctta
tgtaaaggaagatatggattctatttaaaatatgataagttgaatgttgctttgaagaaa
gatacagatattgaacaaatatctttatcggatgctattaagctcatatcagaaaaatta
taa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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