KEGG   Ehrlichia chaffeensis Saint Vincent: ECHSTV_0279
Entry
ECHSTV_0279       CDS       T03348                                 
Name
(GenBank) uvrD/REP helicase N-terminal domain protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
echv  Ehrlichia chaffeensis Saint Vincent
Pathway
echv03420  Nucleotide excision repair
echv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:echv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ECHSTV_0279
   03430 Mismatch repair
    ECHSTV_0279
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:echv03400]
    ECHSTV_0279
Enzymes [BR:echv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ECHSTV_0279
DNA repair and recombination proteins [BR:echv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ECHSTV_0279
   MMR (mismatch excision repair)
    Other MMR factors
     ECHSTV_0279
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_11 AAA_30 ResIII flgE_D3 DUF1195
Other DBs
NCBI-ProteinID: AHX08383
Position
complement(317418..319337)
AA seq 639 aa
MEDYITSLNEDQREAVININGPILILAGAGTGKTRTITSRIAYIINNNFALPSQILAVTF
TNKAANEMLSRISELTPVYNIWLGTFHAIAAKILRQHAEVVGLKNDFTIINTDDQLQVIK
NIVNDMHPEYASDAHKIILNKIQRWKDRGLIPSNITETELYKPINTVALSTYHIYQERLK
FLNCVDFGDLLLYNIQIFTTQHNVLSHYQEQFKYIMVDEYQDINTIQYLWLRLLAQKYKN
LCCVGDDDQSIYSWRGAEVGNILKFSDDFPNAKIVRLECNYRSTSNILDVATAIINNNKS
RLGKKLWTTNEKGQKVNLMKFWDSKAEAQYICEYIKNLHDYQFNETAILVRAGFQTRIFE
EYFIKYSIPYKIIGGTRFYDRQEIRDIIAYLKITVNPNNDIAFERIINKPKRHIGASTLN
KIYLCAKQNNTYFLNAAKILISNNQLPDKASRSLNNLLNKIDSWKESLSSDSISNTVKMI
AYDSGYVDMLENEGENGLARIENIKELFSALLSFNDVNEFLEHISLVTETDSLNYNDNYT
YIMTLHAAKGLEFPIVFLPGWEEGVFPHEKSLQDRTGEALEEERRLAYVGITRAREQLFI
SCVAVRDINNWRQQMKISRFIKELPAEHVQVIKNISSYY
NT seq 1920 nt   +upstreamnt  +downstreamnt
atggaagattatataacttcacttaatgaagaccagagggaagctgtcattaatataaat
ggtcctattttaatattagccggagcaggtacaggtaaaactagaactattacttcaaga
atagcatacatcattaataacaattttgcattacctagccaaattttagcagtaacattt
actaataaagcagcaaacgaaatgctatctagaattagtgaattaacacctgtatataat
atctggttaggaacttttcatgcaatagcagcaaaaatcttaagacagcatgctgaagta
gttggattaaaaaacgattttacaatcattaacacagacgaccaactacaagtaataaaa
aatattgtcaatgacatgcatcccgaatatgcatcagatgcccataaaattatcttaaat
aaaatacaaagatggaaagatagaggacttataccaagcaatattactgaaacagagtta
tataaacctattaatacagtagcattgagtacatatcacatttatcaagaaagattaaaa
tttttaaactgcgttgattttggagacttactactatacaacattcaaatattcactaca
caacataatgtcttatcccattaccaagaacaatttaaatacataatggttgatgaatat
caggacataaatacaattcaatatttatggttaagattattagctcaaaaatacaaaaat
ctatgctgtgttggagatgatgaccaatcaatatatagttggcggggagcagaagtagga
aatattttaaaattttctgatgattttccaaatgcaaaaattgttcgattagaatgtaac
tacagatcaacatctaatatattagacgttgccacagcgataataaataacaataaatca
aggttaggaaaaaagctatggacaacaaacgagaaaggacaaaaagttaatttaatgaaa
ttttgggatagtaaagcagaagcacagtatatatgtgaatatattaaaaatttacatgac
taccaatttaacgagacagctattttagtaagggcaggatttcaaacaagaatattcgag
gaatacttcattaaatatagcataccatataagataattggtggtacaagattctacgat
agacaagaaattcgtgatatcatcgcctatttaaaaattacagttaaccctaataatgac
atcgcttttgaaagaataattaataaacctaaacgacatataggagcatcaactcttaat
aaaatatacttatgtgctaaacaaaataatacatattttttgaacgcagcaaaaattcta
atttcaaataatcaactacctgacaaagcatcccgatctttaaataacttattaaataag
attgactcttggaaagaatctttatcatctgattcaatatcaaacactgttaaaatgata
gcttacgactcaggatatgtagacatgttagaaaacgaaggtgaaaatggtttagcaaga
atagaaaacataaaagaacttttttctgcattattaagttttaatgatgtaaatgaattt
ttagaacacatcagccttgtaacagaaacagactcattaaattacaatgacaactacaca
tatattatgacattacatgcagcaaaaggattagaattccctatagtttttctacctgga
tgggaagaaggagtatttccacatgaaaaatctttacaagacagaacaggagaagcacta
gaagaagagagaagactcgcctatgttgggattacacgagcacgtgaacaactatttata
tcatgcgtagcagtaagagatattaacaactggcgccagcaaatgaaaatatcaagattt
ataaaggaattacctgcagaacatgtacaagttataaaaaatatttctagctattattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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