KEGG   Escherichia coli K-12 W3110: JW1889
Entry
JW1889            CDS       T00068                                 
Symbol
araF
Name
(GenBank) L-arabinose transporter subunit
  KO
K10537  L-arabinose transport system substrate-binding protein
Organism
ecj  Escherichia coli K-12 W3110
Pathway
ecj02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:ecj00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    JW1889 (araF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ecj02000]
    JW1889 (araF)
Transporters [BR:ecj02000]
 ABC transporters, prokaryotic type
  Saccharide, polyol, and lipid transporters
   L-Arabinose transporter
    JW1889 (araF)
SSDB
Motif
Pfam: Peripla_BP_1 Peripla_BP_4 DUF1651 DUF5421
Other DBs
NCBI-ProteinID: BAA15721
UniProt: P02924
Structure
Position
complement(1987276..1988265)
AA seq 329 aa
MHKFTKALAAIGLAAVMSQSAMAENLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIK
IAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKG
KPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMD
ALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATE
GQGFKAADIIGIGINGVDAVSELSKAQATGFYGSLLPSPDVHGYKSSEMLYNWVAKDVEP
PKFTEVTDVVLITRDNFKEELEKKGLGGK
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcacaaatttactaaagccctggcagccattggtctggcagccgttatgtcacaatcc
gctatggcggagaacctgaagctcggttttctggtgaagcaaccggaagagccgtggttc
cagaccgaatggaagtttgccgataaagccgggaaggatttagggtttgaggttattaag
attgccgtgccggatggcgaaaaaacattgaacgcgatcgacagcctggctgccagtggc
gcaaaaggtttcgttatttgtactccggaccccaaactcggctctgccatcgtcgcgaaa
gcgcgtggctacgatatgaaagtcattgccgtggatgaccagtttgttaacgccaaaggt
aagccaatggataccgttccgctggtgatgatggcggcgactaaaattggcgaacgtcag
ggccaggaactgtataaagagatgcagaaacgtggctgggatgtcaaagaaagcgcggtg
atggcgattaccgccaacgaactggataccgcccgccgccgtactacgggatctatggat
gcgctgaaagcggccggattcccggaaaaacaaatttatcaggtacctaccaaatctaac
gacatcccgggggcatttgacgctgccaactcaatgctggttcaacatccggaagttaaa
cattggctgatcgtcggtatgaacgacagcaccgtgctgggcggcgtacgcgcgacggaa
ggtcagggctttaaagcggccgatatcatcggcattggcattaacggtgtggatgcggtg
agcgaactgtctaaagcacaggcaaccggcttctacggttccctgctgccaagcccggac
gtacatggctataaatccagcgaaatgctttacaactgggtagcaaaagacgttgaaccg
ccaaaatttaccgaagttaccgacgtggtactgatcacgcgtgacaactttaaagaagaa
ctggagaaaaaaggtttaggcggtaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   PROTHERM (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (10)   
   PDB (10)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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