KEGG   Escherichia coli K-12 W3110: JW2635
Entry
JW2635            CDS       T00068                                 
Symbol
ygaF
Name
(GenBank) hypothetical protein
  KO
K15736  (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
Organism
ecj  Escherichia coli K-12 W3110
Pathway
ecj00310  Lysine degradation
ecj01100  Metabolic pathways
ecj01120  Microbial metabolism in diverse environments
Module
ecj_M00956  Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:ecj00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    JW2635 (ygaF)
Enzymes [BR:ecj01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.5  With a quinone or similar compound as acceptor
    1.1.5.13  (S)-2-hydroxyglutarate dehydrogenase
     JW2635 (ygaF)
SSDB
Motif
Pfam: DAO Pyr_redox_2 Mqo NAD_binding_9 Amino_oxidase NAD_binding_8 FAD_binding_2 Thi4 Trp_halogenase
Other DBs
NCBI-ProteinID: BAA16521
UniProt: P37339
Position
2788638..2789906
AA seq 422 aa
MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTGHNSGVIHAGVYYTPGS
LKAQFCLAGNRATKAFCDQNGIRYDNCGKMLVATSDLEMERMRALWERTAANGIEREWLN
ADELREREPNITGLGGIFVPSSGIVSYRDVTAAMAKIFQSRGGEIIYNAEVSGLNEHKNG
VVIRTRQGGEYEASTLISCSGLMADRLVKMLGLEPGFIICPFRGEYFRLAPEHNQIVNHL
IYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSFSDTLEILGSSGIRR
VLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLSLSDLQPWPAGVRAQAVSPDGKLIDDF
LFVTTPRTIHTCNAPSPAATSAIPIGAHIVSKVQTLLASQSNPGRTLRAARSVDALHAAF
NQ
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactg
attgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgt
caccagacgggccacaacagcggcgtgatccatgccggggtctattacacgcccggcagc
ctgaaggcgcagttttgcctggcgggaaaccgcgccaccaaagccttttgcgatcaaaac
ggcattcgctacgacaactgcggcaagatgctggttgccacgtccgatctcgaaatggaa
cggatgcgcgccttatgggaacgcacagcggcgaacggtatcgagcgcgaatggcttaac
gccgacgaactgcgcgagcgcgaaccgaatatcaccgggctcggcggcatttttgtgccg
tccagcggcattgtcagctaccgcgacgtgacggcggcgatggcaaaaatcttccagtcc
agaggcggtgaaattatctataacgccgaagtcagcgggcttaatgagcataaaaacggc
gtggtgatacgtacccgtcagggcggcgaatatgaagcatcaacgctgattagctgttcc
gggctgatggctgaccggctggtgaaaatgctcggactcgaaccgggctttatcatctgc
ccgttccgtggcgagtatttccgccttgcgccggagcataaccagattgttaaccacctg
atttaccccattcccgacccggcaatgccgtttttgggcgttcatctcacccgcatgatc
gacggcagcgtgaccgtcgggccaaacgcggtgctggctttcaaacgcgaaggctatcgc
aagcgcgacttctcatttagcgacacgctggagattttgggctcgtcggggattcgccgg
gtgctgcaaaaccatctacgctcaggactgggcgagatgaaaaactcgctgtgcaaaagc
ggctatctgcggctggtgcaaaagtattgtccccggctttcgttaagcgatctccagccc
tggcccgccggtgtgcgggcgcaggcggtatcgccggacggcaagctgattgacgatttt
ctgtttgtcaccaccccgcgcacgatccacacctgcaatgcgccctccccggcagcgaca
tcagcaattcctattggtgcgcatattgtcagcaaggtacaaacgctgttggcaagccag
agtaaccccggacgcacgctgcgagcggcacgtagtgtggatgccttacacgccgcattt
aatcaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (3)   
   KEGG MODULE (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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