KEGG   Escherichia coli K-12 W3110: JW4200
Entry
JW4200            CDS       T00068                                 
Symbol
treR
Name
(GenBank) DNA-binding transcriptional repressor
  KO
K03485  LacI family transcriptional regulator, trehalose operon repressor
Organism
ecj  Escherichia coli K-12 W3110
Brite
KEGG Orthology (KO) [BR:ecj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecj03000]
    JW4200 (treR)
Transcription factors [BR:ecj03000]
 Prokaryotic type
  Helix-turn-helix
   LacI family
    JW4200 (treR)
SSDB
Motif
Pfam: LacI Peripla_BP_3 Peripla_BP_1 HTH_23 HTH_3 HTH_31 HTH_IclR HTH_7 MarR_2 HTH_Tnp_ISL3 HTH_29 HTH_Crp_2 HTH_26 HTH_AraC HTH_28 CENP-B_N MarR AAA_18 HHH TrmB HTH_38 Peripla_BP_4
Other DBs
NCBI-ProteinID: BAE78240
UniProt: P36673
Structure
Position
complement(4470979..4471926)
AA seq 315 aa
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQLTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNID
GVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISY
LGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCAT
DTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVT
GRSEPQQIIIPATLS
NT seq 948 nt   +upstreamnt  +downstreamnt
atgcaaaatcggctgaccatcaaagatatcgcgcgcttaagcggcgtggggaaatctaca
gtttcccgggtgctgaataacgaaagcggcgtgagccagctcacccgcgagcgtgttgaa
gcagtgatgaatcagcatggattttccccttcccgctctgcgcgcgctatgcgtgggcaa
agcgataaagtggtcgccatcattgttacccgtctggattcgttgtcagaaaatctcgcc
gttcaaaccatgctgccagcgttctatgaacaaggttacgacccaatcatgatggaaagt
cagttttccccgcaattagttgccgaacatttgggagtgctgaaacggcgtaatatcgac
ggcgtagtgctgttcggttttactggcataacagaagaaatgttagcccactggcagtca
tcgctggttctgctggcgcgtgacgcaaaaggctttgcttcggtctgttatgacgacgaa
ggggcaatcaaaatcctgatgcaacggctgtatgaccaggggcatcgtaatatcagttat
ctcggcgtgccgcacagtgacgtgacaaccggtaagcgacgtcacgaagcctacctggcg
ttctgcaaagcgcataaactgcatcccgttgccgccctgccagggcttgctatgaagcaa
ggctatgagaacgttgcaaaagtgattacgcctgaaactaccgccttactgtgcgcaacc
gacacgctggcacttggcgcaagtaaatacctgcaagagcaacgcatcgacaccttgcaa
ctggcgagcgtcggtaatacgccgttaatgaaattcctccatccggagatcgtaaccgta
gatcccggttacgccgaagctggacgccaggcggcttgccagttgatcgcgcaggtaacc
gggcgcagcgaaccgcaacaaatcatcatccccgccaccctgtcctga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (22)   
   Pfam (22)   
All databases (31)   

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