KEGG T00068: JW5898

Escherichia coli K-12 W3110: JW5898

Entry

JW5898            CDS       T00068

Symbol

yccW

Name

(GenBank) predicted methyltransferase

K06969

23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]

Organism

ecj Escherichia coli K-12 W3110

Brite

KEGG Orthology (KO) [BR:ecj00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ecj03009]
    JW5898 (yccW)
Enzymes [BR:ecj01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.191  23S rRNA (cytosine1962-C5)-methyltransferase
     JW5898 (yccW)
Ribosome biogenesis [BR:ecj03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    JW5898 (yccW)

SSDB

Motif

Pfam:

Methyltrans_SAM Cons_hypoth95 Methyltransf_31 PUA_3 MTS Methyltransf_25 Met_10 Methyltransf_15 Methyltransf_11 PrmA TRM Methyltransf_12 Spermine_synth Methyltransf_10 Methyltr_RsmB-F

Other DBs

NCBI-ProteinID:

BAA35732

UniProt:

P75876

Structure

Position

complement(1029201..1030304)

AA seq 367 aa
MEGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKW
RDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYP
ECSIYDRSDVAVRKKEGMELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQR
DSRLATRRYVENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLD
LSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLL
NEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLK
GFACRVM

NT seq 1104 nt +upstreamnt +downstreamnt
atggaaggtaaagccagcctcggtgaaaccatcgatattgttgatcatcagggaaaatgg
ttagcacgcggcgcttattcgccagcttcgcaaatccgggcgcgcgtctggacgtttgac
ccgtctgagtctatcgacattgcttttttttcccgccgtttgcaacaagcacaaaaatgg
cgtgactggctggcgcaaaaagatggcctcgacagctatcgtttaatcgccggagaatct
gatggcctgccgggtattactatcgatcgtttcggtaattttctggtgctgcaactgctg
agtgctggggcagaatatcagcgcgcggcattaattagtgccctgcaaacgctgtacccg
gaatgttcgatttacgatcgcagcgacgtcgcggtacgtaaaaaagaaggaatggagctg
acccagggccccgtcaccggcgagttgccacctgccctgctgccgattgaagaacacgga
atgaaactgctggtggatattcagcacggacacaaaacgggctactacctggaccagcgt
gatagccgcctggctacccgccgctacgttgaaaataaacgtgtgctgaactgtttctcc
tataccggtggtttcgccgtatcggcactgatgggcggttgcagccaggttgtcagcgtt
gatacctcccaggaagcgctggatattgcacggcagaacgttgagctgaacaaactggat
ctgagcaaggctgagtttgtccgtgatgatgtctttaaattgctgcgtacttatcgcgat
cgcggtgaaaaatttgacgttatcgtgatggacccgccgaagtttgttgagaataaaagc
cagttgatgggcgcgtgtcgtggttataaagacatcaacatgctggcgattcagctgctg
aatgaaggcggtattctcctgactttctcctgttccggtctgatgaccagcgatttattt
cagaaaatcatcgcggatgccgcaattgatgccggtcgtgatgtacaatttatagagcag
ttccgtcaggcagccgatcatccggtgatcgctacctatccggaagggctatatctgaaa
gggtttgcctgtcgcgtcatgtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (15)   
   Pfam (15)   
All databases (26)   

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