KEGG   Escherichia coli ATCC 8739: EcolC_3210
Entry
EcolC_3210        CDS       T00697                                 
Name
(GenBank) thiamine biosynthesis/tRNA modification protein ThiI
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
ecl  Escherichia coli ATCC 8739
Pathway
ecl00730  Thiamine metabolism
ecl01100  Metabolic pathways
ecl01240  Biosynthesis of cofactors
ecl04122  Sulfur relay system
Module
ecl_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:ecl00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    EcolC_3210
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    EcolC_3210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ecl03016]
    EcolC_3210
Enzymes [BR:ecl01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     EcolC_3210
Transfer RNA biogenesis [BR:ecl03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    EcolC_3210
SSDB
Motif
Pfam: ThiI THUMP QueC Diphthami_syn_2 Rhodanese tRNA_Me_trans Glyco_hydro_42
Other DBs
NCBI-ProteinID: ACA78832
UniProt: B1J026
Position
complement(3516650..3518098)
AA seq 482 aa
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDENQR
LAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHDFS
SIDVERYVGGGLNQHIESARVKLTNPEVTVHLEVEDDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTMPEYCGVISKSPTVKAVKSKI
EAEEEKFDFSILDKVVEEANNVDIREIAQQTEQEVVEVETVNGFGPNDVILDIRSIDEQE
DKPLKVEGIDVVSLPFYKLSTKFGDLDQNKTWLLWCERGVMSRLQALYLREQGFNNVKVY
RP
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcgcttg
cgctttataaaaatccttaccgggaacattcgtaacgttttaaagcactatgatgagacg
ctcgctgtcgtccgccactgggataacatcgaagttcgcgcaaaagatgaaaaccagcgt
ctggctattcgcgacgccctgacccgtattccgggtatccaccatattctcgaagtcgaa
gacgtgccgtttaccgacatgcacgatattttcgagaaagcgttggttcagtatcgcgat
cagctggaaggcaaaaccttctgcgtacgcgtgaagcgccgtggcaaacatgattttagc
tcgattgatgtggaacgttacgtcggcggcggtttaaatcagcatattgagtccgcgcgc
gtgaagctgaccaatccggaagtgactgtccatctggaagtggaagacgatcgtctcctg
ctgattaaaggccgctacgaaggtattggcggtttcccgatcggcacccaggaagatgtg
ctgtcgctcatttccggtggtttcgactccggtgtttccagttatatgttgatgcgtcgc
ggctgccgcgtgcattactgcttctttaacctcggcggcgcggcgcatgaaattggcgtg
cgtcaggtggcgcattatctgtggaatcgttttggcagctcccaccgcgtgcgttttgtc
gctattaatttcgaaccggtcgtcggggaaattctcgagaaaatcgacgacggtcagatg
ggcgttatcctcaaacgtatgatggtgcgtgccgcgtctaaagtggctgaacgttacggc
gtacaggcgctggtcaccggcgaagcgctcggccaggtgtccagtcagacgctgaccaac
ctgcgcctgattgataacgtctctgatacgctgatcctgcgtccgctgatttcttacgac
aaagagcacatcatcaacctggcccgccagattggcactgaagactttgctcgcacgatg
ccggaatattgtggcgtgatctccaaaagcccgacggtgaaagcggttaaatcgaagatt
gaagcggaagaagagaagttcgacttcagcattctcgataaagtggttgaggaggcgaat
aacgttgatatccgcgaaatcgcccagcagaccgagcaggaagtggtggaagtggaaacc
gtcaatggcttcggcccgaacgacgtgatcctcgatatccgttctatcgatgaacaggaa
gataagccactgaaagtcgaagggattgatgtggtttctctgccgttctataaactgagc
accaaatttggcgatctcgaccagaacaaaacttggctgctgtggtgtgagcgcggggtg
atgagccgtctgcaggcgctctatctgcgcgagcagggctttaacaatgtgaaggtatat
cgcccgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (31)   

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