KEGG   Enterobacter hormaechei subsp. hoffmannii ECNIH3: ECNIH3_00985
Entry
ECNIH3_00985      CDS       T03350                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
ecla  Enterobacter hormaechei subsp. hoffmannii ECNIH3
Pathway
ecla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ecla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ECNIH3_00985 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecla03021]
    ECNIH3_00985 (rho)
   03019 Messenger RNA biogenesis [BR:ecla03019]
    ECNIH3_00985 (rho)
Transcription machinery [BR:ecla03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     ECNIH3_00985 (rho)
Messenger RNA biogenesis [BR:ecla03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ECNIH3_00985 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB AAA_22 AAA_25 AAA FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: AIN20934
Position
201742..203001
AA seq 419 aa
MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENSRNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atgggactggaaaaccaggctcgtatgcgcaagcaggacatcattttcgccatcctgaag
caacacgctaagagtggcgaagatatctttggcgacggtgtgctggagatactgcaagac
ggatttggtttcctccgctctgcagacagctcctacctcgccggccctgacgacatctac
gtatcccctagccaaatccgccgtttcaacctccgcactggtgacaccatttcaggtaag
attcgtcctccaaaagagggtgaacgctactttgcgctgttgaaggttaatgaagtcaac
tacgacaaaccggaaaactcccgcaataagatcctgttcgagaacttaacgccgctgcac
gcgaactctcgtctgcgtatggagcgtggtaacgggtctactgaagacttaaccgctcgt
gtgctggatctggcatcgccaattggtcgtggccagcgtggtctgattgtggcgccgcca
aaagccggtaaaaccatgctgctgcaaaacatcgcgcagagcattgcttacaaccatcca
gactgtgtgctgatggtgctgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggggaagtggttgcgtcaaccttcgacgagcctgcttcccgccacgtt
caggttgcggaaatggttatcgagaaggcgaaacgcctggttgagcacaagaaagacgtg
atcatcctgctcgattccattacccgtctggcgcgtgcctacaacaccgtggtgccggct
tccggtaaagtactgaccggtggtgtggatgccaacgccctgcatcgtccgaagcgtttc
ttcggtgcggcgcgtaacgtggaagagggcggtagcctgaccattatcgcgacggcgctg
atcgataccggctccaaaatggacgaagttatttacgaagagtttaaaggtacaggcaac
atggaactgcacctttctcgtaaaatcgcagaaaaacgcgtcttcccggcgatcgactac
aaccgttccggtacccgtaaagaagagctgcttaccactcaggaagagctgcagaaaatg
tggatcctgcgcaaaatcatccatccaatgggcgaaatcgacgcaatggaattcctcatt
aacaaactggcgatgactaaaacgaacgacgatttcttcgacatgatgaaacgctcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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