KEGG   Enterobacter cloacae ECNIH4: ECNIH4_01200
Entry
ECNIH4_01200      CDS       T03486                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
ecln  Enterobacter cloacae ECNIH4
Pathway
ecln03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ecln00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ECNIH4_01200 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecln03021]
    ECNIH4_01200 (rpoB)
   03400 DNA repair and recombination proteins [BR:ecln03400]
    ECNIH4_01200 (rpoB)
Enzymes [BR:ecln01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ECNIH4_01200 (rpoB)
Transcription machinery [BR:ecln03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ECNIH4_01200 (rpoB)
DNA repair and recombination proteins [BR:ecln03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ECNIH4_01200 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2
Other DBs
NCBI-ProteinID: AIX52933
UniProt: A0A2T4Y626
Position
242921..246949
AA seq 1342 aa
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALQYTTEQILDLFFEKVIFEIRDNKLQME
LVPERLRGETASFDIEADGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVAAKD
YVDESTGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETIRVDPTTDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIYAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQRAYDLGTDVRQKVDLNTFSDEEVLRLAENLRKGMPIATPVFDGAKEAEIKELLQ
LGGLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq 4029 nt   +upstreamnt  +downstreamnt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggacattccatatctcctttctatccagcttgactcgttccagaagtttatcgag
caagatcctgaagggcagtacggtctggaagccgccttccgttccgtgttcccgattcag
agctacagcggtaactccgagctgcagtacgtcagctaccgccttggcgaaccggtgttt
gacgttcaggaatgtcagatccgtggcgtgacctattccgcaccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgtaaaagacattaaagaacaa
gaagtctacatgggtgaaattccactcatgacagacaacggtactttcgttatcaacggt
actgagcgtgttatcgtttcccagctgcatcgtagcccgggcgtcttcttcgacagcgat
aaaggtaaaacacactcttccggtaaagtactgtataacgcacgcatcattccttaccgt
ggttcatggctggacttcgagttcgatccaaaagacaacctgtttgtccgtatcgaccgt
cgtcgtaagctgcctgcaaccatcattctgcgtgcgctgcaatataccactgagcagatc
ctggacctgttctttgagaaagtgatctttgaaatccgcgacaacaagttgcagatggag
ctggtgccggaacgtctgcgtggtgagaccgcgtcgttcgacatcgaagccgacggcaaa
gtgtatgtggaaaaaggtcgccgtatcaccgcgcgccacatccgccagctggaaaaagat
gatatcaaacacatcgaagttccggttgagtacattgcaggaaaagtagccgcgaaagat
tacgttgatgaatcaactggcgagctgatctgcccggctaacatggagctgagcctggat
ctgctggctaagctgagccagtctggccacaaacgtatcgaaacgctgttcaccaacgat
ctggaccacggtccttatatctctgagactatccgcgtcgacccaacgaccgatcgtctg
agcgcgctggttgaaatctaccgcatgatgcgtcctggtgagccaccaactcgcgaagcg
gctgaaagcctgttcgagaacctgttcttctccgaagaccgctacgatttgtccgcggta
ggtcgtatgaagttcaaccgttctctgctgcgtgatgagatcgaaggttccggtatcctg
agcaaagacgacatcatcgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtggacgatatcgaccacctcggcaaccgtcgtatccgttccgtaggcgaaatggcg
gaaaaccagttccgcgttggcctggtacgtgttgagcgtgcggttaaagagcgtctgtct
ctgggcgatctggataccctgatgcctcaggatatgatcaacgccaagccgatttctgcg
gcagtgaaagagttcttcggttccagccagctgtctcagttcatggaccagaacaacccg
ctgtctgagattacgcacaaacgtcgtatttctgcactcggcccaggcggtctgacccgt
gaacgtgcaggcttcgaagttcgagacgtacacccgacgcactatggtcgcgtatgtcca
atcgaaacgcctgaaggtccaaacatcggtctgatcaactccctgtccgtgtacgcacag
acaaacgaatacggtttcctcgaaacgccgtatcgtaaagtgaccgacggtgttgtaacc
gacgaaattcattacctgtctgctatcgaagaaggcaactacgttatcgctcaggcgaac
tccaacctggatgacgaaggccactttgtagaagatctggttacctgccgtagcaaaggc
gaatccagcttgttcagccgcgaccaggttgactacatggacgtatccacccagcaggtg
gtatccgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggccgttccaactctgcgtgctgataagccgctggtt
ggtaccggtatggaacgtgctgttgccgttgactccggtgttactgcagttgctaagcgt
ggcggtaccgttcagtacgttgacgcatcccgtatcgttatcaaagttaacgaagacgag
atgtatccgggcgaagcgggtatcgacatctacaacctgaccaaatacacccgttctaac
cagaacacctgtatcaaccagatgccttgtgtatctctgggtgagccagttgagcgcggc
gacgtgctggcagacggtccgtccaccgacctcggtgaactggcgctcggtcagaacatg
cgcgtagcgttcatgccgtggaacggttacaacttcgaagactccatcctcgtctccgag
cgtgtggttcaggaagatcgtttcaccaccatccacattcaggaactggcatgtgtgtcc
cgtgacaccaagctggggccagaagagatcacggccgatatccctaacgtgggtgaagca
gcgctctccaaactggatgaatccggtattgtttacatcggtgcggaagtgaccggcggt
gacattctggttggtaaggtgacaccgaaaggtgaaacccagctgacgccagaagagaaa
ctgctgcgtgccatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgta
ccaaacggtgtttccggtacggttatcgacgttcaggtcttcacccgtgatggcgttgag
aaagataagcgtgcactggaaatcgaagagatgcagctcaagcaggctaagaaagacctg
tctgaagaactgcagatcctcgaagcaggtttgttcagccgtatttatgcggtgctggtt
gccggtggcgttgaagctgagaagctcgacaaactgccacgcgatcgctggctggaactg
ggcctgaccgacgaagagaaacagaatcagctggaacagctggctgagcagtatgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgcaaaatcactcagggcgac
gatctggcaccaggcgtgctgaagattgttaaggtgtatctggccgttaaacgtcagatc
cagcctggtgataagatggcaggtcgtcacggtaacaagggtgttatctctaagatcaac
ccgatcgaagatatgccgcacgatgctaacggtactccggtagatatcgtactgaaccca
ctgggcgtaccgtctcgtatgaacatcggtcagattctggaaacccacctgggtatggct
gcgaaaggtatcggcgacaagatcaacgccatgctgaaacagcagcaggaagtcgcgaaa
ctgcgcgaattcatccagcgtgcctacgatctgggtaccgacgttcgtcagaaagtcgac
ctgaacaccttcagcgatgaagaagtgctgcgtctggcagagaacctgcgcaaaggtatg
ccaattgcaacgccggtcttcgacggtgcaaaagaagctgaaattaaagagctgctgcaa
ctgggtggtctgccaacgtctggtcagattacgctgtttgacggccgtaccggtgaacag
tttgagcgtccggtaaccgtaggttacatgtacatgctgaaactgaaccacctggtcgac
gacaaaatgcacgctcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggcacagttcggtggtcagcgcttcggggagatggaagtgtgggcgctggaagca
tacggcgcggcatacaccctgcaggaaatgctcaccgttaagtctgatgacgtgaacggt
cgtaccaagatgtataaaaacatcgtggacggcaaccatcagatggaaccgggcatgcca
gagtccttcaacgtactgttgaaagagattcgttcgctgggtatcaacatcgaactggaa
gacgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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