KEGG   Enterobacter roggenkampii 35734: LI67_005955
Entry
LI67_005955       CDS       T04878                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
ecls  Enterobacter roggenkampii 35734
Brite
KEGG Orthology (KO) [BR:ecls00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ecls03032]
    LI67_005955
   03036 Chromosome and associated proteins [BR:ecls03036]
    LI67_005955
   03400 DNA repair and recombination proteins [BR:ecls03400]
    LI67_005955
DNA replication proteins [BR:ecls03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LI67_005955
Chromosome and associated proteins [BR:ecls03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    LI67_005955
DNA repair and recombination proteins [BR:ecls03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      LI67_005955
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: AKZ72291
UniProt: A0A167QS56
Position
1:1102188..1102460
AA seq 90 aa
MNKSQLIDKIAAGADISKAAAGRALDALIASVTESLQAGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPGFRAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataaatctcaactgattgacaaaattgctgctggtgctgatatttctaaagctgca
gctggacgtgcgttagatgcattaattgcttctgttactgaatctctgcaggctggggac
gacgttgcactggtaggcttcggtacttttgctgttaaagagcgtgctgcccgtactggc
cgcaaccctcagaccggtaaagagatcaccattgctgccgctaaagtgccgggtttccgt
gcaggtaaagcgctgaaagacgcagtaaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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