KEGG   Enterobacter hormaechei subsp. xiangfangensis: LI66_13180
Entry
LI66_13180        CDS       T03707                                 
Symbol
yebU
Name
(GenBank) RNA methyltransferase RsmF
  KO
K11392  16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
Organism
eclx  Enterobacter hormaechei subsp. xiangfangensis
Brite
KEGG Orthology (KO) [BR:eclx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:eclx03009]
    LI66_13180 (yebU)
Enzymes [BR:eclx01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.178  16S rRNA (cytosine1407-C5)-methyltransferase
     LI66_13180 (yebU)
Ribosome biogenesis [BR:eclx03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    LI66_13180 (yebU)
SSDB
Motif
Pfam: Methyltr_RsmB-F YebU_pre-PUA_dom Methyltr_RsmF_N Methyltranf_PUA Methyltransf_31 Methyltransf_25 PCMT Ubie_methyltran TRM
Other DBs
NCBI-ProteinID: AJB82257
Position
2768439..2769902
AA seq 487 aa
MFPCGVPVAQNSVFLPEQFLAQMREALPAHLSFDDFVAACQRPLRRSIRVNTLKISVGAF
LDLVSPYGWQLTPVPWCEEGFWIERDEEESLPLGSTAEHLSGLFYIQEASSMLPVAALFA
DGNQPERVMDVAAAPGSKTTQIAARMNNRGAILANEFSASRVKVLHANISRCGIHNVALT
HFDGRVFGAALPEAFDAILLDAPCSGEGVVRKDPDALKNWSVESNLEIAATQRELIDSAF
HALRPGGTLVYSTCTLNRDENEDVCLWLKQRYVDAVQFLPLDTLFDSASHAATPEGFLHV
FPQIYDCEGFFVARLRKTRAVDPLPAPKFKVGNFPFAPVKGREAAQAQAAASKVGLHWDE
SLRLWMRDKELWLFPVNIEPLIGKVRFSRLGIRLAEIHNKGYRWQHEAVIALAGSENTFA
LTHQEAEEWYRGRDVYPEDGPLQDEVIVTYQGYPLGLAKKVGSRLKNSYPRELVRDGRLF
TGNNRSA
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgtttccctgtggtgtgcccgtggctcaaaactccgtatttcttcccgaacaattcctc
gcacagatgcgcgaggcgcttccagctcatctctctttcgacgatttcgtcgccgcatgc
cagcgccctttgcgccggagtattcgcgtcaatacgctgaaaatcagcgtcggggcgttt
ctggatctcgtctccccctacggctggcaattaacgccagtgccgtggtgtgaagagggt
ttctggatcgaacgggatgaagaggagagcctgccgctcggcagcaccgccgagcacctg
agcgggctgttttatattcaggaagccagctccatgctgccggttgctgcgctgtttgcc
gacgggaaccagcctgagcgggttatggatgtcgcggcggcgccgggctctaaaaccacg
cagattgccgcccggatgaacaaccgcggcgcgatcctcgccaacgaattttccgccagc
cgcgttaaagtcctgcatgccaatatcagccgctgcgggatccacaacgtcgcgttaacg
cacttcgatggtcgcgtgtttggcgctgccctgccggaagcctttgatgccatcctgctc
gacgcgccctgctccggcgaaggcgtggtgcgtaaagatcctgatgcgttaaaaaactgg
tccgttgaaagcaacctggagatcgccgccacgcagcgcgaactgatcgacagcgcgttt
catgccctgcgcccaggcgggacgctggtttactctacctgcacgctgaatcgcgatgaa
aacgaggacgtctgcctgtggctcaagcaacgctatgtggatgccgtccagtttctgccg
ctggacaccctcttcgactcggccagccatgcggccacgcctgaaggcttcctgcatgtc
ttcccgcagatttacgattgcgaaggcttctttgttgcccgtctgcgtaaaacccgcgcc
gtcgatcccttgcctgcccctaagtttaaggtcggcaacttcccgttcgcgccggtcaaa
ggccgtgaggcggcacaggcgcaagcggctgcgagcaaagtcggcctgcactgggatgag
agcctgcgcctctggatgcgtgacaaagagctgtggctgttcccggtcaacatcgaaccg
ctgattggtaaggtgcgtttctcccgcctcggtattcgcctggcggagatccacaacaaa
ggctatcgctggcagcacgaagcggtcattgcgctggccggcagtgagaacacctttgcc
ctgacgcatcaggaagcggaagagtggtatcgcggtcgtgacgtttacccggaagacggc
ccgttacaggatgaagtcatcgtgacgtatcagggctatccgctggggctggcgaaaaaa
gtcggctcgcggctgaaaaacagctatccgcgcgaactggtacgcgatggccgcctgttt
accggtaacaaccgcagcgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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