KEGG T03709: LI64

Enterobacter hormaechei subsp. hormaechei: LI64_05135

Entry

LI64_05135        CDS       T03709

Name

(GenBank) transcriptional regulator HU subunit alpha

K03530

DNA-binding protein HU-beta

Organism

eclz Enterobacter hormaechei subsp. hormaechei

Brite

KEGG Orthology (KO) [BR:eclz00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:eclz03032]
    LI64_05135
   03036 Chromosome and associated proteins [BR:eclz03036]
    LI64_05135
   03400 DNA repair and recombination proteins [BR:eclz03400]
    LI64_05135
DNA replication proteins [BR:eclz03032]
Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LI64_05135
Chromosome and associated proteins [BR:eclz03036]
Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    LI64_05135
DNA repair and recombination proteins [BR:eclz03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      LI64_05135

SSDB

Motif

Pfam:

Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1

Other DBs

NCBI-ProteinID:

AJB69970

Position

1077140..1077412

AA seq 90 aa
MNKSQLIDKIAAGADISKAAAGRALDALIASVTESLQAGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPGFRAGKALKDAVN

NT seq 273 nt +upstreamnt +downstreamnt
gtgaataaatctcaactgattgacaaaattgctgcgggtgctgatatttctaaagctgca
gctggacgtgctttagatgctttaattgcttctgttactgaatctctgcaagctggggac
gacgttgcactggtaggcttcggtacttttgcggttaaagagcgtgcagcccgtactggc
cgcaaccctcagaccggtaaagagatcaccattgctgccgctaaagtgccgggtttccgt
gcaggtaaagcgctgaaagacgcagtaaactga

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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