KEGG   Escherichia coli SMS-3-5 (environmental): EcSMS35_2966Help
Entry
EcSMS35_2966      CDS       T00672                                 

Gene name
recD
Definition
(GenBank) exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
ecm  Escherichia coli SMS-3-5 (environmental)
Pathway
ecm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ecm00001]
 Genetic Information Processing
  Replication and repair
   03440 Homologous recombination
    EcSMS35_2966 (recD)
Enzymes [BR:ecm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     EcSMS35_2966 (recD)
DNA repair and recombination proteins [BR:ecm03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     EcSMS35_2966 (recD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: AAA_30 AAA_19 Helicase_RecD UvrD_C_2 Viral_helicase1 AAA_11 UvrD-helicase DUF2075 AAA_22 AAA_16 UvrD_C PhoH AAA_28 MukB T2SSE Bcl-2 CbiA FtsK_SpoIIIE AAA_29 SRP54 AAA_33 TrwB_AAD_bind NTPase_1 AAA
Motif
Other DBs
NCBI-ProteinID: ACB19425
UniProt: B1LR16
Structure
PDB: 

Position
complement(3039266..3041092)
Genome map
AA seq 608 aa AA seqDB search
MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLEN
NEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVA
RFFNEVNHAIEVDEALLAQTLDKLFPVSDDINWQKVAAAVALTRRISVISGGPGTGKTTT
VAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQ
LASVEAGAVLGDICAYANAGFTAERAGQLSRLTGTHIPSGTGTEAASLRDSLCLLQKSYR
FGSDSGIGQLAAAINRGDKMAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALSGYGRYLD
LLQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRNPHSRWYEGR
PVMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHK
SQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGL
AALFSSRG
NT seq 1827 nt NT seq  +upstreamnt  +downstreamnt
atgaaattgcaaaagcaattactggaagctgtggagcacaaacagctacgcccgctggac
gtgcagtttgccctgaccgtggcgggagatgaacatcctgccgtcaccctcgcggcggca
ctgttaagtcatgatgccggagagggacacgtttgtttgccgctttcacgactggaaaat
aacgaggcatcgcatccgctgttggcgacctgtgtcagtgaaatcggtgagctacaaaat
tgggaagaatgcttgctggcttcacaagcggtcagccggggagatgaaccaacgccgatg
atcctctgtggcgatcgtctttatttgaatcgcatgtggtgtaacgagcgcacagtggca
cgctttttcaacgaagtgaatcatgccattgaggttgatgaagctctactggcgcaaacc
ctggacaaactttttccagtaagcgatgacattaactggcaaaaagtggcggcggcagtg
gcgctgacgcggcggatttcggtgatttccggcggtcctggcaccggtaaaacgaccacc
gtagcgaagttgctggcagccttaattcaaatggccgacggagaacgctgccgtatccgt
ctggctgcaccaacgggtaaagctgccgcgcgcttaaccgaatctctcggcaaggctttg
cgccagttaccgctgaccgatgaacaaaagaaacgcattccggaagatgccagtactttg
caccgattgctgggcgcacagccgggtagccagcgtttacgtcatcatgccggtaacccg
ctgcatcttgatgtgctggtagtagatgaagcgtcaatgatcgatctgccgatgatgtcg
agactgatagacgccttgcccgatcatgcgcgagtgatctttctcggcgatcgtgatcaa
ctggcctcggttgaggctggggctgtgctgggcgatatttgtgcttatgccaatgccggc
tttaccgccgagcgtgccgggcagctaagccgcctgacgggaactcacattccgtcagga
actggcacagaagcggcatctttgcgcgacagtctctgcctgctgcaaaaaagctatcgt
ttcggcagcgattctggcattggtcagttagctgcggcgattaaccgtggtgataaaatg
gcagtgaaaaccgtttttcagcaggattttactgatatcgaaaaacggcttttacagagc
ggcgaagattatattgcgatgcttgaggaagctctttcgggttacggacgttatctggat
ctgctgcaagcgcgtgccgagccggatttaatcattcaggcgttcaatgagtaccagctt
ttgtgcgccctgcgggaagggccgtttggcgtggctggactgaatgagcgaattgagcag
tttatgcaacagaagcgcaaaattcatcgtaatccgcactctcgttggtacgaaggccga
ccggtgatgattgcccgtaatgacagcgcgcttgggttgtttaatggcgatatcggtatt
gcgctggatcgcgggcaggggacgcgcgtctggtttgcgatgccggacggcaatattaag
tctgtgcaaccgagtcgcttgccagagcacgaaacgacgtgggcgatgacggtacataaa
tcgcagggatcggagttcgaccatgcggcgttgattttaccgagccaacgcacgccagta
gtaacacgagagctggtttacactgcggtgacccgcgcgcgtcgccgtctgtcgctgtat
gccgatgagcgcattttaagtgcggcaattgccacgcgcaccgagcggcgcagcggtctg
gcggcgttgtttagttcacggggataa

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