KEGG   Escherichia coli K-12 MG1655: b0846
Entry
b0846             CDS       T00007                                 
Symbol
rcdA
Name
(RefSeq) DNA-binding transcriptional regulator RcdA
  KO
K23778  TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
eco  Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:eco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:eco03000]
    b0846 (rcdA)
Transcription factors [BR:eco03000]
 Prokaryotic type
  Helix-turn-helix
   TetR/AcrR family
    b0846 (rcdA)
SSDB
Motif
Pfam: TetR_C_31 TetR_N TetR_C_6 TetR_C_28 TetR_C_11
Other DBs
NCBI-GeneID: 945473
NCBI-ProteinID: NP_415367
Pasteur: ybjK
RegulonDB: ECK120003044
ECOCYC: G6444
ASAP: ABE-0002885
UniProt: P75811
Structure
Position
887423..887959
AA seq 178 aa
MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDELLLEAF
SSFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRKPLLK
TVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERVAG
NT seq 537 nt   +upstreamnt  +downstreamnt
atgcgtcgcgctaacgatccgcaacggcgagaaaaaattatccaggccacgctggaggcg
gtgaaactttacggaatacatgctgttacgcaccgcaaaattgctacccttgccggggta
ccgttgggatcgatgacctactatttttcaggaattgatgagttgttactggaggcgttc
agcagttttactgagatcatgtcccggcaatatcaggcattttttagcgatgttagtgat
gctccgggcgcatgccaggctatcaccgatatgatctacagctcacaggttgcaacgccg
gataacatggagctgatgtaccagctctacgcgctggctagccgaaaaccgctattaaaa
acggtaatgcaaaactggatgcagcgcagtcagcaaacgctcgaacaatggtttgaaccc
ggaaccgcccgcgcgcttgatgcgtttattgaggggatgacgctgcattttgtcaccgac
cgtaagccgctatcgcgcgaggagattttgaggatggttgagagggttgcagggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ASAP (1)   
   ECOCYC (1)   
   OC (1)   
   PASTEUR (1)   
   REGULONDB (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
3D Structure (4)   
   PDB (4)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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